search for: aquacultur

...s=2,cex.axis=0.8,cex=0.8) This labels all the tickmarks in my barplot, which is the default behavior. I would like to label every other tick mark in the barplot --> 1,3,5,7 and so on. Thank you very much for your help! All the best, A -- Alfredo Tello (http://alfredotello.com) Sustainable Aquaculture Group Institute of Aquaculture University of Stirling Scotland, UK. [[alternative HTML version deleted]]

...iff medianpolish mas There are many options within each method. I would appreciate a hint on the best combination. Thank you very much in advance. Roger Roger L. Vallejo, Ph.D. Computational Biologist & Geneticist U.S. Department of Agriculture, ARS National Center for Cool & Cold Water Aquaculture 11861 Leetown Road Kearneysville, WV 25430 Voice: (304) 724-8340 Ext. 2141 Email: roger.vallejo@ars.usda.gov http://www.ars.usda.gov/pandp/people/people.htm?personid=37662 [[alternative HTML version deleted]]

...nction. How do I change it? Thanks a lot for the help on the use of "topTable" function from the LIMMA package. Roger Roger L. Vallejo, Ph.D. Computational Biologist & Geneticist U.S. Department of Agriculture, ARS National Center for Cool & Cold Water Aquaculture 11861 Leetown Road Kearneysville, WV 25430 Voice: (304) 724-8340 Ext. 2141 Email: roger.vallejo@ars.usda.gov <mailto:roger.vallejo@ars.usda.gov> [[alternative HTML version deleted]]

Dear All, How to cite the PDF user's guide for the LIMMA package? This is not about how to cite the LIMMA package. Roger Roger L. Vallejo, Ph.D. Computational Biologist & Geneticist U.S. Department of Agriculture, ARS National Center for Cool & Cold Water Aquaculture 11861 Leetown Road Kearneysville, WV 25430 Voice: (304) 724-8340 Ext. 2141 Email: roger.vallejo@ars.usda.gov [[alternative HTML version deleted]]

...sn't mix well as it is judged by the autocorrelation. The Box-Cox transformation of data suggests a square root transformation. When I analysed the square root transformed data the chain mix well, distributions are OK, but results change when different prior. Alex Dr Alex Safari Aquaculture and Genetic Improvement The WorldFish Center, Penang, MALAYSIA Telephone: 60 4 620 2175 Fax: 60 4 626 5530 (GMT +8) e-mail: a.safari@cgiar.org http://www.worldfishcenter.org <http://www.worldfishcenter.org/> Reducing poverty and hunger by improving fisheries and aquaculture...

...ith age, education etc.. How can i arrange it in a .csv format for R to perform the function? I know it?s seems a trivial problem but I just cant seem to get my had around it and its the first step to start the analysis. Any guidance would be really helpful! Thanks. oh yes - I am an MSc student in aquaculture investigating land use values in mangrove environments. Sakchai McDonough -- View this message in context: http://r.789695.n4.nabble.com/Multinomial-Logit-data-arrangement-tp4492173p4492173.html Sent from the R help mailing list archive at Nabble.com.

...send the PAM and DIANA results to output files including information on genes (Names) per each cluster. Thank you very much. Roger Roger L. Vallejo, Ph.D. Computational Biologist & Geneticist U.S. Department of Agriculture, ARS National Center for Cool & Cold Water Aquaculture 11861 Leetown Road Kearneysville, WV 25430 Voice: (304) 724-8340 Ext. 2141 Email: roger.vallejo@ars.usda.gov <mailto:roger.vallejo@ars.usda.gov> [[alternative HTML version deleted]]

...on later ****************************************************************** I will apreciate help to troubleshoot this error. Thank you very much. Roger Roger L. Vallejo, Ph.D. Computational Biologist & Geneticist U.S. Department of Agriculture, ARS National Center for Cool & Cold Water Aquaculture 11861 Leetown Road Kearneysville, WV 25430 Voice: (304) 724-8340 Ext. 2141 Email: roger.vallejo@ars.usda.gov http://www.ars.usda.gov/pandp/people/people.htm?personid=37662 [[alternative HTML version deleted]]

...rgence error code = 1 message = singular convergence (7) I will appreciate your help in pointing mistakes in this R script. Thank you very much. Roger Roger L. Vallejo, Ph.D. Computational Biologist & Geneticist U.S. Department of Agriculture, ARS National Center for Cool & Cold Water Aquaculture 11861 Leetown Road Kearneysville, WV 25430 Voice: (304) 724-8340 Ext. 2141 Email: roger.vallejo@ars.usda.gov http://www.ars.usda.gov/pandp/people/people.htm?personid=37662 [[alternative HTML version deleted]]

...nFactor=yy) option. Is there a way to get around this or does this mean that my model is not estimable with R? I am running Debian unstable i386 and R 1.3.0. Thanks, Kari ---------------------------------------------- Kari Ruohonen Finnish Game and Fisheries Research Institute Socioeconomic and Aquaculture Research Turku Game and Fisheries Research It?inen Pitk?katu 3, 20520 Turku, Finland tel. +358-20-5751681, +358-40-5238321 (mobile) fax +358-20-5751689 http://www.rktl.fi -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci....

...Roger PS. To avoid you going to the LIMMA User's Guide. I show below the indicated example and R commands used. Please see below. Roger L. Vallejo, Ph.D. Computational Biologist & Geneticist U.S. Department of Agriculture, ARS National Center for Cool & Cold Water Aquaculture 11861 Leetown Road Kearneysville, WV 25430 Voice: (304) 724-8340 Ext. 2141 Email: roger.vallejo@ars.usda.gov <mailto:roger.vallejo@ars.usda.gov> **************************************** > targets SlideNumber FileName Cy3 Cy5 ml12med 12 ml12med.spot CD4 CD8 ml13med 13 ml1...

...rvals around these "new" fitted values (i.e. fitted "new" = fitted + autocorrelated error component)? Thanks in advance, Kate ====================================== Kate Stark | PhD candidate Institute of Antarctic & Southern Ocean Studies & Tasmanian Aquaculture & Fisheries Institute University of Tasmania. ====================================== [[alternative HTML version deleted]]

...rediction) intervals around these "new" fitted values (i.e. fitted "new" = fitted + autocorrelated error component)? Thanks in advance, Kate ====================================== Kate Stark | PhD candidate Institute of Antarctic & Southern Ocean Studies & Tasmanian Aquaculture & Fisheries Institute University of Tasmania.

....DFO-MPO.CA=09 USERDOMAIN PAC=09 USERNAME HaighR=09 USERPROFILE C:\Documents and Settings\haighr=09 VSEDEFLOGDIR C:\Documents and Settings\All Users\Application Data\McAfee\DesktopProtection=09 windir C:\WINDOWS=09 =20 Rowan Haigh Research Biologist, Groundfish Section Marine Ecosystems & Aquaculture Division Fisheries and Oceans Canada Pacific Biological Station, Nanaimo, BC V9T 6N7 Tel. +1 250-756-7123 fac simile +1 250-756-7053 Email Rowan.Haigh at dfo-mpo.gc.ca =20 [[alternative HTML version deleted]]

...ld use it somehow to solve my problem. However, I have not found a way to tell optim() about my sum constraint x1+x2+x3=1. All help is appreciated. Regards, Kari Ruohonen ---------------------------------------------- Kari Ruohonen Finnish Game and Fisheries Research Institute Socioeconomic and Aquaculture Research Turku Game and Fisheries Research It?inen Pitk?katu 3, 20520 Turku, Finland tel. +358-20-5751681, +358-40-5238321 (mobile) fax +358-20-5751689 http://www.rktl.fi -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.t...

...s, one for each season, but while the Mat50 (i.e. mean Size at 50% maturity) is the same as that calculated by the separate lines regression, Im not sure how this may change the StdErr? Regards, Kate Kate Stark | PhD Candidate Institute of Antarctic & Southern Ocean Studies & Tasmanian Aquaculture & Fisheries Institute University of Tasmania Email: kate.stark at utas.edu.au

I've sometimes thought it would be useful to have another mail list called "no I haven't read the documentation but someone can save me a lot of time," or perhaps just "newbie" for short. This can be very useful for people just getting started in R and with school starting soon I expect the help list may become overwhelmed. Of course, I think that people should read all

...mean Size at 50% maturity) is the > same as that calculated by the separate lines regression, Im not sure how > this may change the StdErr? > > Regards, > > Kate > > > Kate Stark | PhD Candidate > Institute of Antarctic & Southern Ocean Studies & > Tasmanian Aquaculture & Fisheries Institute > University of Tasmania > Email: kate.stark at utas.edu.au > > > > ------------------------------ > > Message: 49 > Date: Tue, 01 May 2007 19:12:32 -0700 > From: graham wideman <gwa@grahamwideman.com> > Subject: Re: [R] Concepts que...