Displaying 4 results from an estimated 4 matches for "anasjamshed1994".
2023 Apr 02
1
Count matrix of GSE146049
...> It's a microarray data set, so I don't think you would want to apply
> an RNA-seq pipeline. You'd be better off applying a normalization
> appropriate for this type of microarray data.
>
> HTH,
>
> Peter
>
> On Sun, Apr 2, 2023 at 11:09?PM Anas Jamshed <anasjamshed1994 at gmail.com>
> wrote:
> >
> > I want to get the count matrix of genes from
> > https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE146049. Is it
> > possible for GSE146049? After getting counts, I want to do TMM
> > normalization.
> >
> > [...
2023 Apr 02
1
Count matrix of GSE146049
It's a microarray data set, so I don't think you would want to apply
an RNA-seq pipeline. You'd be better off applying a normalization
appropriate for this type of microarray data.
HTH,
Peter
On Sun, Apr 2, 2023 at 11:09?PM Anas Jamshed <anasjamshed1994 at gmail.com> wrote:
>
> I want to get the count matrix of genes from
> https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE146049. Is it
> possible for GSE146049? After getting counts, I want to do TMM
> normalization.
>
> [[alternative HTML version deleted]]
>...
2023 Apr 02
2
Count matrix of GSE146049
I want to get the count matrix of genes from
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE146049. Is it
possible for GSE146049? After getting counts, I want to do TMM
normalization.
[[alternative HTML version deleted]]