search for: an2

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2003 Jun 24
1
S4 method setClass prototype definition question
...ot;, isResolved="logical", resolve="logical"), prototype(isResolved=FALSE, catId=as.integer(-1)), validity=NULL, sealed=TRUE) [1] "Annotation2" > an2<-new("Annotation2") > an2 An object of class "Annotation2" Slot "x": NULL Slot "y": NULL Slot "catId": [1] -1 Slot "isResolved": [1] FALSE Slot "resolve": logical(0) Slot "valid": [1] TRUE ## so this does...
2011 Dec 07
1
Output table from for loop
...ering my R usage: #the loop is checking variance of rows, and cutting out rows with var>numVec[i] #I define outMat as object names I want to output to (does this make sense? how else #can I define sequential numbered output?) #numVec is numbers I use in the loop head(Counts) AN1 AN2 AN3 AN4 var GENE1 99 0 6 0 2360 GENE2 183 136 137 160 496 GENE3 301 199 233 187 1856 outMat<-paste("NewCounts", 1:5, sep="_") #names of numVec<-c(100,200,500,1000,1500) cutGenes<-function(x) { for (i in 1:5) { ke...
2001 Mar 07
1
unable to open the base package (PR#867)
Hi. I'm trying to use R that someone installed in his own home directory (which is located on a common filesystem). Now, he is able to use it with no problems, but when I try to run it I get the following messages (the first line is just the command line, and the way I call the program): an2 1> /projects/draper/R-1.2.1/bin/R cannot find system Renviron R : Copyright 2001, The R Development Core Team Version 1.2.1 (2001-01-15) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type `license()' or `licence()'...