search for: aminoacids

I have narrowed down the problem. The error Error : 'AminoAcids' is not an exported object from 'namespace:bibliospec' Error : unable to load R code in package 'bibliospec' occurs only if I try to access the data using bibliospec::AminoAcids within the initialize method of an R reference class. It does work, as far as I tested everywhere e...

...s resistant and susceptible. The classification and pruning work fine with Rpart. however there is a problem with displaying the data as a tree in the display window. in the display window the data contain only levels at the splits example: (abcde) left (fg) right. but i would like to have the aminoacids displayed. how can this be achieved ? Rob Kamstra _________________________________________________________________ MSN Search, for accurate results! http://search.msn.nl

Hello, I am using kernlab to do some binary classification on aminoacid strings. I am using a custom kernel, so i use the kernel="matrix" option of the ksvm method. My (normalized) kernel matrix is of size 1309*1309, my results vector has the same length. I am using C-svc. My kernlab call is something similiar to this: ksvm(kernel="matrix", kernelMatrix, trainingDataYs,

I'm not sure if I should bother you team with this, apologies in case it's a bother. I'm trying gcc 6.2.1 (from devtoolset-6) with R, everything seems to work just fine, except for mzR. Here is failed build: g++ -m64 -shared -L/usr/lib64/R/lib -Wl,-z,relro -o mzR.so cramp.o ramp_base64.o ramp.o RcppRamp.o RcppRampModule.o rnetCDF.o RcppPwiz.o RcppPwizModule.o RcppIdent.o

I do this on a vanilla-clean R installation, simply: > biocLite("mzR") it pulls some deps in which compile fine, only mzR fails. ... meanwhile... I grabbed devtools and comiled github master - still fails. Should I attach build log? One should not send attachments to the list.. I don't suppose? On 21/12/16 17:06, Martin Morgan wrote: > mzR is a Bioconductor package, so

mzR is a Bioconductor package, so better to ask on the Bioconductor support forum https://support.bioconductor.org Oh, I see you did, and then the advice is to avoid cross-posting! The missing .o files would have been produced in an earlier compilation step; they likely failed in some way, so you need to provide the complete compilation output. Did you do this on a version of the package

hello every one, How to function more than one loop in R? I have the following problem to be solved with the a method of three loops, can you help me please? The data is attached with this message. The data is composed of two parts, cleaved (denoted by ?cleaved?) and non cleaved (denoted by ?noncleaved?). ? to access to the ith peptide, you can use X$Peptide[i] ? to access to the ith label,