search for: allvars

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2011 Jul 27
2
Use a list to 'transport' a collection of data sets and results
...mple code below. # Create variables of different types x=expand.grid(1:4,letters[1:4]) y=matrix(1:1000,ncol=20) z=list(a=1,b=2:20,c=matrix(1:50,ncol=5)) result.one=1 names(result.one)="first result" result.two=2 names(result.one)="second result" # Put them all in list allvars=list(x,y,z,result.one,result.two) names(allvars)=c("x","y","z","result.one","result.two") ls() [1] "allvars" "result.one" "result.two" "x" "y" "z" # Save it save(a...
2012 Apr 05
1
issue with base:::namespaceImportMethods
...dex: src/library/base/R/namespace.R =================================================================== --- src/library/base/R/namespace.R (revision 58917) +++ src/library/base/R/namespace.R (working copy) @@ -930,8 +930,10 @@ namespaceImportMethods <- function(self, ns, vars) { allVars <- character() + generics <- character() + packages <- character() allFuns <- methods:::.getGenerics(ns) # all the methods tables in ns - packages <- attr(allFuns, "package") + allPackages <- attr(allFuns, "package") pkg <- methods:::ge...
2009 Oct 21
1
odd evaluation within correlation argument of glmmPQL
...me version of MASS is in 2.11.0 as well. *** glmmPQL.R.orig 2009-10-20 23:48:38.000000000 -0400 --- glmmPQL.R 2009-10-20 23:51:33.000000000 -0400 *************** *** 39,44 **** --- 39,47 ---- off <- attr(Terms, "offset") if(length(off<- attr(Terms, "offset"))) allvars <- c(allvars, as.character(attr(Terms, "variables"))[off+1]) + ## add variables in correlation formula, if any + if (!missing(correlation) && !is.null(attr(correlation,"formula"))) + allvars <- c(allvars,all.vars(attr(correlation,"formu...
2010 Dec 03
2
Add columns of dataset
Dear all, I have a dataset that looks like id var1 var2 var4 var7 var8 1 0.0 0.1 0.3 0.9 0.0 2 0.4 0.6 0.0 0.0 0.2 3 0.0 0.0 0.0 0.8 0.7 Some columns are missed, for example, here the fourth (var3), sixth(var5) and seventh (var6) columns. I want to first determine which columns are missed in a huge dataset and then add the missed
2006 Mar 31
1
matching a given sd range
Dear R users given a numeric array (a sequence of reals), I am interested in finding the subsets of sequences (each with start and end index) which match a given sd range. I read the docs on match and which and the "see also" but could not come up with a way. I could loop with a stepping window over the sequence but that would be limited to a fixed size window, I guess I as well
2013 Jan 09
4
how to count "A","C","T","G" in each row in a big data.frame?
Dear All I have a data.frame like that: structure(list(name = c("Gga_rs10722041", "Gga_rs10722249", "Gga_rs10722565", "Gga_rs10723082", "Gga_rs10723993", "Gga_rs10724555", "Gga_rs10726238", "Gga_rs10726461", "Gga_rs10726774", "Gga_rs10726967", "Gga_rs10727581", "Gga_rs10728004",