Displaying 2 results from an estimated 2 matches for "akr2c".
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akr1c
2004 Dec 20
2
problems with limma
...XP
see the following:
> library(RODBC)
> chan1 <- odbcConnectExcel("D:/Data/mgc/Chips/Chips4.xls")
> dd <- sqlFetch(chan1,"Raw") # all data 12000
> #
> nzw <- cbind(dd$NZW1C,dd$NZW2C,dd$NZW3C,dd$NZW1T,dd$NZW2T,dd$NZW3T)
> akr <- cbind(dd$AKR1C,dd$AKR2C,dd$AKR3C,dd$AKR1T,dd$AKR2T,dd$AKR3T)
> bas <- cbind(dd$NZW1C,dd$NZW2C,dd$NZW3C,dd$AKR1C,dd$AKR2C,dd$AKR3C)
> #
> design<-matrix(c(1,1,1,1,1,1,0,0,0,1,1,1),ncol=2)
> fit1 <- lmFit(nzw,design)
> fit1 <- eBayes(fit1)
> topTable(fit1,adjust="fdr",number=5)...
2004 Dec 21
0
Fwd: problems with limma
...t;> library(RODBC)
>> chan1 <- odbcConnectExcel("D:/Data/mgc/Chips/Chips4.xls")
>> dd <- sqlFetch(chan1,"Raw") # all data 12000
>> #
>> nzw <- cbind(dd$NZW1C,dd$NZW2C,dd$NZW3C,dd$NZW1T,dd$NZW2T,dd$NZW3T)
>> akr <- cbind(dd$AKR1C,dd$AKR2C,dd$AKR3C,dd$AKR1T,dd$AKR2T,dd$AKR3T)
>> bas <- cbind(dd$NZW1C,dd$NZW2C,dd$NZW3C,dd$AKR1C,dd$AKR2C,dd$AKR3C)
>> #
>> design<-matrix(c(1,1,1,1,1,1,0,0,0,1,1,1),ncol=2)
>> fit1 <- lmFit(nzw,design)
>> fit1 <- eBayes(fit1)
>> topTable(fit1,adjust=&quo...