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...t TRUE Thanks a lot for any help. Kind regards Raphael Felber ------------------------------------------------------------------------------------ Raphael Felber, Dr. sc. Wissenschaftlicher Mitarbeiter, Klima und Lufthygiene Eidgen?ssisches Departement f?r Wirtschaft, Bildung und Forschung WBF Agroscope Forschungsbereich Agrar?kologie und Umwelt Reckenholzstrasse 191, 8046 Z?rich Tel. 058 468 75 11 Fax 058 468 72 01 raphael.felber at agroscope.admin.ch<mailto:raphael.felber at agroscope.admin.ch> www.agroscope.ch<http://www.agroscope.ch/> [[alternative HTML version deleted]]

Hi Marc That's a workaround I can use. Thanks. I'm a newbie regarding netCDF data. Is there any information I'm losing when switching between the packages? Raphael Von: Marc Girondot [mailto:marc.girondot at u-psud.fr] Gesendet: Mittwoch, 2. August 2017 15:13 An: Felber Raphael Agroscope <raphael.felber at agroscope.admin.ch> Betreff: Re: AW: [R] Remove attribute from netcdf4 object ok. Sorry, I didn't understood good. I don't think you can do it in ncdf4 functions. The only solution would be to open it in RNetCDF, delete the attribute, save it and then open it in nc...

Dear Marc Thanks for your remark. I don't want to use both packages. I mentioned the package RNetCDF to show that there is a similar function I' d like to use. Raphael Von: Marc Girondot [mailto:marc.girondot at u-psud.fr] Gesendet: Mittwoch, 2. August 2017 14:51 An: Felber Raphael Agroscope <raphael.felber at agroscope.admin.ch>; r-help at r-project.org Betreff: Re: [R] Remove attribute from netcdf4 object Le 02/08/2017 ? 12:03, raphael.felber at agroscope.admin.ch<mailto:raphael.felber at agroscope.admin.ch> a ?crit : Dear all For a model I need to combine several ne...

...by the second test). Thanks for any help or comments. Kind regards Raphael ------------------------------------------------------------------------------------ Raphael Felber, PhD Scientific Officer, Climate & Air Pollution Federal Department of Economic Affairs, Education and Research EAER Agroscope Research Division, Agroecology and Environment Reckenholzstrasse 191, CH-8046 Z?rich Phone +41 58 468 75 11 Fax +41 58 468 72 01 raphael.felber at agroscope.admin.ch<mailto:raphael.felber at agroscope.admin.ch> www.agroscope.ch<http://www.agroscope.ch/> [[alternative HTML versio...

...------- # Close #-------------------------- nc_close( ncid_new ) ------------------------------------------------------------------------------------ Raphael Felber, Dr. sc. Wissenschaftlicher Mitarbeiter, Klima und Lufthygiene Eidgen?ssisches Departement f?r Wirtschaft, Bildung und Forschung WBF Agroscope Forschungsbereich Agrar?kologie und Umwelt Reckenholzstrasse 191, 8046 Z?rich Tel. 058 468 75 11 Fax 058 468 72 01 raphael.felber at agroscope.admin.ch<mailto:raphael.felber at agroscope.admin.ch> www.agroscope.ch<http://www.agroscope.ch/> [[alternative HTML version deleted]]

...47 4 40 7 4 47 4 33 14 4 47 4 47 4 47 4 47 4 47 4 > 6 41 > #[26] 4 6 7 9 25 4 47 4 47 4 47 4 22 25 4 33 14 4 6 41 4 47 4 > 22 > > > > Bill Dunlap > TIBCO Software > wdunlap tibco.com > > On Tue, Aug 22, 2017 at 5:53 AM, <raphael.felber at agroscope.admin.ch> > wrote: > >> Dear all >> >> I was thinking about efficient reading data into R and tried several ways >> to test if load(file.Rdata) or readRDS(file.rds) is faster. The files >> file.Rdata and file.rds contain the same data, the first created with &...

On Mon, Aug 14, 2017 at 5:29 AM, <raphael.felber at agroscope.admin.ch> wrote: Dear all > > I'm a newbie regarding netcdf data. Today I realized that I maybe do not > understand some basics of the netcdf. I want to create a *.nc file > containing three variables for Switzerland. All data outside of the country > are NAs. The third varia...

...b$time > quantile(mb$time, .95))) # [1] 6 41 4 47 4 40 7 4 47 4 33 14 4 47 4 47 4 47 4 47 4 47 4 6 41 #[26] 4 6 7 9 25 4 47 4 47 4 47 4 22 25 4 33 14 4 6 41 4 47 4 22 Bill Dunlap TIBCO Software wdunlap tibco.com On Tue, Aug 22, 2017 at 5:53 AM, <raphael.felber at agroscope.admin.ch> wrote: > Dear all > > I was thinking about efficient reading data into R and tried several ways > to test if load(file.Rdata) or readRDS(file.rds) is faster. The files > file.Rdata and file.rds contain the same data, the first created with > save(d, ' file.Rdata&...

Le 02/08/2017 ? 12:03, raphael.felber at agroscope.admin.ch a ?crit : > Dear all > > For a model I need to combine several netCDF files into one (which works fine). For better overview I'd like to delete/remove some of the attributes. Is there a simple way doing this? > > I'm using the package netcdf4, which creates an object...

...t this has no effect. Thanks for any help. Kind regards Raphi ------------------------------------------------------------------------------------ Raphael Felber, Dr. sc. Wissenschaftlicher Mitarbeiter, Klima und Lufthygiene Eidgen?ssisches Departement f?r Wirtschaft, Bildung und Forschung WBF Agroscope Forschungsbereich Agrar?kologie und Umwelt Reckenholzstrasse 191, 8046 Z?rich Tel. 058 468 75 11 Fax 058 468 72 01 raphael.felber at agroscope.admin.ch<mailto:raphael.felber at agroscope.admin.ch> www.agroscope.ch<http://www.agroscope.ch/> [[alternative HTML version deleted]]

...37", "sa38", "sa39", "sa40")) Eisenring Michael, Dr. Federal Department of Economic Affairs, Education and Research EAER Agroecology and Environment Biosafety Reckenholzstrasse 191, CH-8046 Z?rich Tel. +41 58 468 7181 Fax +41 58 468 7201 michael.eisenring at agroscope.admin.ch<mailto:michael.eisenring at agroscope.admin.ch> www.agroscope.ch<http://www.agroscope.ch/> [[alternative HTML version deleted]]

You need to study how reading files works in your operating system. This question is not about R. -- Sent from my phone. Please excuse my brevity. On August 22, 2017 5:53:09 AM PDT, raphael.felber at agroscope.admin.ch wrote: >Dear all > >I was thinking about efficient reading data into R and tried several >ways to test if load(file.Rdata) or readRDS(file.rds) is faster. The >files file.Rdata and file.rds contain the same data, the first created >with save(d, ' file.Rdata', comp...

..."x-score",parAsColFcVn = dta.factor,parEllipsesL = TRUE) Eisenring Michael, Dr. Federal Department of Economic Affairs, Education and Research EAER Agroecology and Environment Biosafety Reckenholzstrasse 191, CH-8046 Z?rich Tel. +41 58 468 7181 Fax +41 58 468 7201 michael.eisenring at agroscope.admin.ch<mailto:michael.eisenring at agroscope.admin.ch> www.agroscope.ch<http://www.agroscope.ch/> [[alternative HTML version deleted]]

...a37", "sa38", "sa39", "sa40")) Eisenring Michael, Dr. Federal Department of Economic Affairs, Education and Research EAER Agroecology and Environment Biosafety Reckenholzstrasse 191, CH-8046 Z?rich Tel. +41 58 468 7181 Fax +41 58 468 7201 michael.eisenring at agroscope.admin.ch<mailto:michael.eisenring at agroscope.admin.ch> www.agroscope.ch<http://www.agroscope.ch/> [[alternative HTML version deleted]]

...ion. But thanks anyway for your time. Cheers Raphael > -----Urspr?ngliche Nachricht----- > Von: Jeff Newmiller [mailto:jdnewmil at dcn.davis.ca.us] > Gesendet: Dienstag, 22. August 2017 18:33 > An: J C Nash <profjcnash at gmail.com>; r-help at r-project.org; Felber Raphael > Agroscope <raphael.felber at agroscope.admin.ch> > Betreff: Re: [R] How to benchmark speed of load/readRDS correctly > > Caching happens, both within the operating system and within the C > standard library. Ostensibly the intent for those caches is to help > performance, but you are ri...

...e). What I would like to change is the label that says: "Residuals vs. Fitted" and "Q-Q normal". So what other cex commands are there? THX for any help. Bernhard Müller ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Eidgenössisches Volkswirtschaftsdepartement EVD Forschungsanstalt Agroscope Reckenholz-Tänikon ART Ökologische Landbausysteme Reckenholzstrasse 191, CH-8046 Zürich Tel. ++41 (0)44 / 377 74 47 FAX ++41 (0)44 / 377 72 01 mailto:bernhard.mueller@art.admin.ch http://www.reckenholz.ch [[alternative HTML version deleted]]

...se comparison is not that usefull and clear to look at. How would I do that? Is there an other test that does give grouping as output? Thnaks for your help. Bernhard Müller, Master Student ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Eidgenössisches Volkswirtschaftsdepartement EVD Forschungsanstalt Agroscope Reckenholz-Tänikon ART Ökologische Landbausysteme Reckenholzstrasse 191, CH-8046 Zürich Tel. ++41 (0)44 / 377 74 47 FAX ++41 (0)44 / 377 72 01 mailto:bernhard.mueller@art.admin.ch http://www.reckenholz.ch [[alternative HTML version deleted]]

...nested within Sex. If you just refer to within and between subject effects and their corresponding degrees of freedom: you should see this being handled automatically and correctly by lme e.g. in the output of anova (model.lme) Lorenz - Lorenz Gygax Centre for proper housing of ruminants and pigs Agroscope Reckenholz-T?nikon Research Station ART T?nikon, CH-8356 Ettenhausen / Switzerland

Caching happens, both within the operating system and within the C standard library. Ostensibly the intent for those caches is to help performance, but you are right that different low-level caching algorithms can be a poor match for specific application level use cases such as copying files or parsing text syntax. However, the OS and even the specific file system drivers (e.g. ext4 on flash disk

Not convinced Jeff is completely right about this not concerning R, since I've found that the application language (R, perl, etc.) makes a difference in how files are accessed by/to OS. He is certainly correct that OS (and versions) are where the actual reading and writing happens, but sometimes the call to those can be inefficient. (Sorry, I've not got examples specifically for file