Displaying 1 result from an estimated 1 matches for "affyrawdata".
2007 Jan 23
3
the value of Delta
Dear all,
I am running R 2.4.1.
> library(siggenes);
> library(multtest);
> cl<-rep(c(0,1),c(3,3));
> sub<-exprs(AffyExpData[,c(1:3,7:9)]);
> gn<-geneNames(AffyRAwData);
> sam.out<-sam(sub,cl,rand=123,gene.names=gn);
We're doing 20 complete permutations
> sam.out
SAM Analysis for the Two-Class Unpaired Case Assuming Unequal Variances
Delta p0 False Called FDR
1 0.1 0.929 292.25 293 0.927
2 0.4 0.929 43.60 56 0.724
3 0.7...