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...will calculate the label offsets to avoid this overlapping problem? Thanks Ana -- Ana Conesa Bioinformatics and Genomics Department Centro de Investigaciones Principe Felipe Avda. Autopista Saler 16, 46012 Valencia, Spain Phone: +34 96 328 96 80 Fax: +34 96 328 97 01 http://bioinfo.cipf.es/aconesa http://www.blast2go.org ========================================== FIRST INTERNATIONAL COURSE IN AUTOMATED FUNCTIONAL ANNOTATION AND DATA MINING Valencia/Orlando, September/October 2009 http://bioinfo.cipf.es/blast2gocourse

Dear list, I am looking for a function/way to get the array coordinates of given elements in an array. What I mean is the following: - Let X be a 3D array - I find the ordering of the elements of X by ord <- order(X) (this returns me a vector) - I now want to find the x,y,z coordinates of each element of ord Can anyone help me? Thanks! Ana

Hi, See ?Sweave in library(tools). HTH Thomas -----Urspr?ngliche Nachricht----- Von: Ana Conesa [mailto:aconesa at ivia.es] Gesendet: Donnerstag, 4. Dezember 2003 09:34 An: r-help at stat.math.ethz.ch Betreff: [R] Table to pdf Hi all, I am new in R world and I haven't been able to find the answer to my question in the documentation I looked up so far. I hope someone can help. In the R fun...

...1)*K >>> >>> and your index is (k,m,n) >>> >>> I am almost sure that there is a function in R which >>> does this (it exists in Matlab). >>> >>> Regards, >>> >>> Moshe. >>> >>> --- Ana Conesa <aconesa at ochoa.fib.es> wrote: >>> >>> > Dear list, >>> > >>> > I am looking for a function/way to get the array >>> > coordinates of given >>> > elements in an array. What I mean is the following: >>> > - Let X be a 3D...

...@@@O@@O@ Center for Citrus Genomics @O@@@@O@ Instituto Valenciano de Investigaciones Agrarias (IVIA) @@@O@@@@ Carretera Moncada - Naquera, Km. 4,5 @@@@O@ 46113 Moncada (Valencia) SPAIN || Tel. +34 963424000 ext.70161; Fax. +34 963424001 || email: aconesa at ivia.es

Hi, Does anyone know an R function to impute hamming distance? Thanks Ana O@@@@@ &nb @@@O@@O@ Centro de Gen?mica @O@@@@O@ Instituto Valenciano de Investigaciones Agrarias (IVIA) @@@O@@@@ Carretera Moncada - Naquera, Km. 4,5 @@@@O@ 46113 Moncada (Valencia) SPAIN || & || &

Dear list I am using the mvr function of the package pls.pcr to compute PLS resgression using a X matrix of gene expression variables and a Y matrix of medical varaibles. I would like to obtain the R2 (sum of squares captured by the model) and Q2 (proportion of total sum of squares captured in leave-one-out cross validation) of the model. I am not sure if there are specific slots in the