search for: acnuc

...The seqinR package is a library of utilities to retrieve and analyse biological sequences. A new version of seqinR, seqinR 1.0-7, has been released on CRAN. Here is a summary of changes: o A new *experimental* function extractseqs() to download sequences thru zlib compressed sockets from an ACNUC server is released. Preliminary tests suggest that working with about 100,000 CDS is possible with a home ADSL connection. See the manual chapter 3 page 44 at http://pbil.univ-lyon1.fr/software/SeqinR/seqinr_1_0-7.pdf for some system.time() examples. o As pointed by Emmanuel Prestat the U...

...The seqinR package is a library of utilities to retrieve and analyse biological sequences. A new version of seqinR, seqinR 1.0-7, has been released on CRAN. Here is a summary of changes: o A new *experimental* function extractseqs() to download sequences thru zlib compressed sockets from an ACNUC server is released. Preliminary tests suggest that working with about 100,000 CDS is possible with a home ADSL connection. See the manual chapter 3 page 44 at http://pbil.univ-lyon1.fr/software/SeqinR/seqinr_1_0-7.pdf for some system.time() examples. o As pointed by Emmanuel Prestat the U...

...or r-bugs for bug report about seqinR. Use instead the seqinR diffusion list: http://pbil.univ-lyon1.fr/software/SeqinR//mailing.php?lang=eng A new version of seqinR, seqinR 1.1-4, has been released on CRAN. Here is a summary of changes: o There is a new chapter to explain how to set up a local ACNUC server on Unix-like platforms. o Function GC() has gained a new argument NA.GC defaulting to NA to say what should be returned when the GC content cannot be computed from data (for instance with a sequence like NNNNNNNNNNNN). The argument oldGC is now deprecated and a warning is issued. Fu...

...or r-bugs for bug report about seqinR. Use instead the seqinR diffusion list: http://pbil.univ-lyon1.fr/software/SeqinR//mailing.php?lang=eng A new version of seqinR, seqinR 1.1-4, has been released on CRAN. Here is a summary of changes: o There is a new chapter to explain how to set up a local ACNUC server on Unix-like platforms. o Function GC() has gained a new argument NA.GC defaulting to NA to say what should be returned when the GC content cannot be computed from data (for instance with a sequence like NNNNNNNNNNNN). The argument oldGC is now deprecated and a warning is issued. Fu...

Dear all, I have a data which is in text file and i would like to import the data to R. From the manual, i?ve found the read.table command function is the most appropriate but when i wrote the command an error had occur. It say ?Error in read.table"C:/Users/user/Documents/cfa-1.txt", header = T, sep = "\t",skip=10) :more columns than column names?. Please help me with this as