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9_t
2009 Sep 17
1
How to colour the tip labels in a phylogenetic tree
...f the tree.
The closest I've come is this:
Given that 'tree_ja$tip.label' provides the following:
[1] "1_T1" "2_T1" "3_T1" "4_T1" "5_T1" "6_T1"
[7] "7_T1" "8_T1" "9_T1" "10_T1" "11_T1" "12_T1"
and that my 'subspecies' vector is:
subspecies <- c("1_T1", "2_T1", "3_T1", "4_T1", "6_T1")
which can also be written as:
subspecies <- c(tree_ja$tip.label[1:4],...