Displaying 3 results from an estimated 3 matches for "37491735".
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371735
2011 Sep 15
2
R functions
...ke:
Chr start end sample1 sample2
chr2 9896633 9896683 0 0
chr2 9896639 9896690 0 0
chr2 14314039 14314098 0 -0.35
chr2 14404467 14404502 0 -0.35
chr2 14421718 14421777 -0.43 -0.35
chr2 16031710 16031769 -0.43 -0.35
chr2 16036178 16036237 -0.43 -0.35
chr2 16048665 16048724 -0.43 -0.35
chr2 37491676 37491735 0 0
chr2 37702947 37703009 0 0
Now I want to summarize the values like
Sample Chr Start End Values Probes
1 chr2 9896633 14404502 0 4
1 chr2 14421718 16048724 -0.43 4
1 chr2 37491676 37703001 0 2
2 chr2 9896633 9896690 0 2
2 chr2 14314039 16048724 -0.35 6
2 chr2 37491676 37703009 0 2
Here the st...
2011 Sep 26
1
How to Store the executed values in a dataframe & rle function
...tart end sample1 sample2
chr2 9896633 9896683 0 0
chr2 9896639 9896690 0 0
chr2 14314039 14314098 0 -0.35
chr2 14404467 14404502 0 -0.35
chr2 14421718 14421777 -0.43 -0.35
chr2 16031710 16031769 -0.43 -0.35
chr2 16036178 16036237 -0.43 -0.35
chr2 16048665 16048724 -0.43 -0.35
chr2 37491676 37491735 0 0
chr2 37702947 37703009 0 0
This is the output that I am expecting:
Sample Chr Start End Values Probes
sample1 chr2 9896633 14404502 0 4
sample1 chr2 14421718 16048724 -0.43 4
sample1 chr2 37491676 37703001 0 2
sample2 chr2 9896633 9896690 0 2
sample2 chr2 14314039 16048724 -0.35 6
sa...
2011 Sep 28
0
Rle function to expand for many samples
...9896633 9896683 0 0 0
chr2 9896639 9896690 0 0 0
chr2 14314039 14314098 0 -0.35 0
chr2 14404467 14404502 0 -0.35 0.32
chr2 14421718 14421777 -0.43 -0.35 0.32
chr2 16031710 16031769 -0.43 -0.35 0.32
chr2 16036178 16036237 -0.43 -0.35 0.45
chr2 16048665 16048724 -0.43 -0.35 0.45
chr2 37491676 37491735 0 0 0.45
chr2 37702947 37703009 0 0 0
>s
Values Probes
1 0.00 4
2 -0.43 4
3 0.00 2
4 0.00 2
5 -0.35 6
6 0.00 2
7 0.00 3
8 0.32 3
9 0.45 3
10 0.00 1
Here s is nothing but sumarising similiar values with Probes giving t...