search for: 2aggacc

Displaying 1 result from an estimated 1 matches for "2aggacc".

2009 Jan 19
1
Deleting columns where the frequency of values are too disparate
...e set of A,T,C,G) or one other allele (from the set of A,T,C, G). For example, at Locus1 individuals have have either the A or T allele only; at Locus2 the individuals can have either C or G only; at Locus3 the individuals can have either T or G only. IDLocus1Locus2Locus3Locus4Locus5Locus6 1AGTAAC 2AGGACC 3ACGGCC 4ACGGCC 5AGGGAC 6TGGGCC 7TCGGCC 8TCGGAC 9TGGGCC 10TCGGCC 11AGGGAC 12ACGGCC 13AGGGCC 14AGGGAC 15ACGGCC 16TCGGCC 17TGGGAC 18TGGGCC 19TGGGCC 20TCGGAC I want to delete any columns from the dataset where the rarer of the two alleles has a frequency of ten percent or less. In other words, I woul...