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21000x100
2004 Apr 12
1
Very large matrices for very large genome
Hello,
I am using R to look at whole-genome gene expression data. This means
about 27,000 genes, each with a vector of numbers reflecting expression at
different tissues and times. I need to do an all against all co-expression
calculation (basically, just calculate Pearson's r for every gene-gene
pair). I try to store the result of such a thing in a 27000x27000 matrix,
but r seems not to like