Displaying 2 results from an estimated 2 matches for "146a".
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146
2009 May 23
2
counting occurrence of text in a dataframe
...t (by gene) and then counting the length of each gene element. However I thought that there might be a more elegant solution.
Tanaka Mitchell Wang Hunter Chen Chim
miR-191* let-7e let-7b miR-126 let-7a let-7g
miR-198 let-7f let-7c miR-146a let-7b let-7i
miR-22 let-7g miR-1224 miR-16 let-7d miR-130b
miR-223 let-7i miR-124 miR-191 let-7f miR-133a
miR-296 let7fG15A miR-125a-3pmiR-222 let-7g miR-140
miR-30d miR-101 miR-125b-5pmiR-223 let-7i miR-142-5p
miR-37...
2012 Nov 06
1
Filling dataframe incorrectly in for loop
..."C:/Desktop/mirtarget2_predictions.txt"
data = read.table(file1, header=FALSE, sep="\t")
colnames(data) = c("mir", "gene", "score")
data$mir = as.character(data$mir)
data$gene = as.character(data$gene)
#input miR of Interest
mirs = c("hsa-miR-146a-5p", "hsa-miR-215")
#create table of miR targets
table = data.frame(data[0,])
for(i in 1:length(mirs))
{
holder = subset(data, data$mir==mirs[i])
table = holder
}
The problem is that each time the loop runs, table is being overwritten by
holder, and I can't create something lik...