Displaying 2 results from an estimated 2 matches for "144x5300".
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2002 Oct 28
1
R-1.6.0 crashing on RedHat6.3
...code crashes with the message:
Error: cannot allocate vector of size 13 Kb
Execution halted
There's nothing special about the code I'm trying to run,
in fact it's pretty simple (just memory intensive):
library(mva)
pc.norm <- princomp(D,scores=FALSE)
D is a matrix of dim 144x5300
My only guess, based on my very limited knowledge, is the
problem stems from some outdated shared library.
The machine is an two-processor intel-based PC running RedHat6.3.
I would provide more info, but I'm not really sure what's relevant
and I'm not very system-savvy.
I know...
2002 Oct 29
0
PCA with n << p (was R-1.6.0 crashing on RedHat6.3)
...; > one would expect that you had run into that before.
> 1.6.0 has a memory
> > > > > leak but it generally affects repeated applications
> of model fits,
> > > > > rather than big matrices.
> > > > >
> > > > > Do you really mean 144x5300 ? (more columns than
> rows) That's big: The
> > > > > covariance matrix at 5300x5300 will take more than
> 200 MB (OK, it
> > > > > might only be storing upper or lower triangle.) I
> tried a matrix like
> > > > > that on a 1.6.1beta system...