search for: 00_pkg_src

Hi, With recent versions of R-devel, "R CMD check" complains about some "Rd files with unknown sections". hpages at gladstone:~> R CMD check multtest_1.9.4.tar.gz ... ... * checking Rd files ... WARNING Rd files with unknown sections: /home/hpages/multtest.Rcheck/00_pkg_src/multtest/man/boot.resample.Rd: notes /home/hpages/multtest.Rcheck/00_pkg_src/multtest/man/MTP.Rd: notes See chapter 'Writing R documentation files' in manual 'Writing R Extensions'. ... ... WARNING: There was 1 warning, see /home/hpages/multtest.Rcheck/00check.log for de...

Hi all, R CMD check does not work for me under Windows. This is the error R CMD check mypackage.tar.gz * checking for working latex ... OK tar: and: Not found in archive tar: Settings/miguez/ ... /00_pkg_src: Not found in archive tar: Error exit delayed from previous errors Error: cannot untar mypackage.tar.gz I know tar is available because R CMD build created the tarball in the first place and man tar works. I'm mostly working in Linux but if I can fix this it would be nice. Ok now I'm th...

...ing R version 2.1.1, 2005-06-20 * checking for file 'VR/DESCRIPTION' ... OK * looks like 'VR' is a package bundle * this is bundle 'VR' version '7.2-19' * checking if this is a source bundle ... OK installing R.css in C:/work/VR.Rcheck Looks like `C:/work/VR.Rcheck/00_pkg_src/VR' is a package bundle ---------- Making package MASS ------------ adding build stamp to DESCRIPTION installing NAMESPACE file and metadata making DLL ... making MASS.d from MASS.c making lqs.d from lqs.c gcc -Ic:/PROGRA~1/r/rw2011/include -Wall -O2 -c MASS.c -o MASS.o gcc -Ic:/P...

...: cannot set reparse point 'C:\DOCUME~1\THIERR~2\LOCALS~1\Temp\RtmpMZUCyo\RLIBS_15585fa46d84/watervogels', reason 'De in de reparsepuntbuffer aanwezige gegevens zijn ongeldig' Error in flink(normalizePath(pkgdir), tmplib) : cannot link from U:\svn2\watervogels\watervogels.Rcheck\00_pkg_src\watervogels * removing 'U:/svn2/watervogels/watervogels.Rcheck/watervogels' A translation of the error message: The data in the reparse point buffer are invalid. ir. Thierry Onkelinx Instituut voor natuur- en bosonderzoek / Research Institute for Nature and Forest team Biometrie & Kwa...

Based on some testing it seems to me that if I have a package with a dataset in /data a Sweave vignette in inst/doc (but no associated pdf file) the vignette loads the data in /data through data(dataset) and I do a R CMD build R will try to build the pdf version of the vignette, but will be unable to find the dataset in data because the package is not yet installed. However, if I do

...html latex example chm testhare text html latex example chm unstrip text html latex example chm xhare text html latex chm hhc: not found cp: cannot stat `C:/polsplineRS.Rcheck/00_pkg_src/polsplineRS/chm/polsplineRS.chm': No such file or directory make[1]: *** [chm-polsplineRS] Error 1 make: *** [pkg-polsplineRS] Error 2 *** Installation of polsplineRS failed *** Removing 'C:/polsplineRS.Rcheck/polsplineRS' I am slowly figuring out all of this R stuff so I apologize fo...