R SIG Debian - Oct 2006 - Problems with package foreign (r-cran-foreign)

On 12 October 2006 at 13:02, Gregor Gorjanc wrote:
| Hello!
| 
| I encounter the following problem when I try to load package foreign
| 
| library(foreign)
| Error in dyn.load(x, as.logical(local), as.logical(now)) :
| 	unable to load shared library
'/usr/lib/R/library/foreign/libs/foreign.so':
|   /usr/lib/R/library/foreign/libs/foreign.so: undefined symbol:
| Rf_allocString
| Error: package/namespace load failed for 'foreign'
| 
| I have installed R as deb packages and I get above behaviour in 2.4.0-1.
|  I have tried to reinstall r-cran-foreign but got the same behaviour.
| However, if I install package foreign via install.packages() there is no
| such problem. CRAN version of package is 0.8-17, while r-cran-foreign is
| 0.8-15 and it seems that it needs to be updated.

Yes, please see http://bugs.debian.org/392084  

I forgot to actually upload foreign, but that has been done now. Tip: install
the devscripts package and try

$ rmadison foreign		# shows source pkg
$ rmadison r-cran-foreign	# shows binary per arch.

Also, too many packages in testing depend on R 2.4.0 --- so you may want R
2.4.0 from testing.  I'm CCing r-sig-debian as a heads up.

Thanks for the report,  Dirk

| 
| Thanks!
| 
| -- 
| Lep pozdrav / With regards,
|     Gregor Gorjanc
| ----------------------------------------------------------------------
| University of Ljubljana     PhD student
| Biotechnical Faculty
| Zootechnical Department     URI: http://www.bfro.uni-lj.si/MR/ggorjan
| Groblje 3                   mail: gregor.gorjanc <at> bfro.uni-lj.si
| 
| SI-1230 Domzale             tel: +386 (0)1 72 17 861
| Slovenia, Europe            fax: +386 (0)1 72 17 888
| 
| ----------------------------------------------------------------------
| "One must learn by doing the thing; for though you think you know it,
|  you have no certainty until you try." Sophocles ~ 450 B.C.
| ----------------------------------------------------------------------

-- 
Hell, there are no rules here - we're trying to accomplish something. 
                                                  -- Thomas A. Edison

Dirk Eddelbuettel wrote:
> On 12 October 2006 at 13:02, Gregor Gorjanc wrote:
...
> I forgot to actually upload foreign, but that has been done now. Tip:
install
> the devscripts package and try
> 
> $ rmadison foreign		# shows source pkg
> $ rmadison r-cran-foreign	# shows binary per arch.
> 
> Also, too many packages in testing depend on R 2.4.0 --- so you may want R
> 2.4.0 from testing.  I'm CCing r-sig-debian as a heads up.
> 
I apologize for late response. Yes,

aptitude install -t unstable r-cran-foreign

solves my problem. Thank you Dirk for this and also other Debian-R
related work. rmadison command rocks. I was always wondering how one
could easily get info that rmadison spits out so nicely and fast!

-- 
Lep pozdrav / With regards,
    Gregor Gorjanc
----------------------------------------------------------------------
University of Ljubljana     PhD student
Biotechnical Faculty
Zootechnical Department     URI: http://www.bfro.uni-lj.si/MR/ggorjan
Groblje 3                   mail: gregor.gorjanc <at> bfro.uni-lj.si

SI-1230 Domzale             tel: +386 (0)1 72 17 861
Slovenia, Europe            fax: +386 (0)1 72 17 888

----------------------------------------------------------------------
"One must learn by doing the thing; for though you think you know it,
 you have no certainty until you try." Sophocles ~ 450 B.C.