I don't see anything obviously wrong here. There may be something
subtle, but we probably won't be able to help without a reproducible
example ...
On 2024-08-16 9:24 a.m., SIBYLLE ST?CKLI via R-help
wrote:> Dear community
>
>
>
> I tried the following code using geom_boxplot() and notch=TRUE. Does anyone
> know if the command ?notch=TRUE? is at the wrong place in my special code
> construct?
>
>
>
> Without notch=TRUE the code provides the planned ggplot.
>
>
>
> Kind regards
>
> Sibylle
>
>
>
> Code:
>
>
>
> MS1<- MS %>% filter(QI_A!="NA") %>% droplevels()
>
> MS1$Jahr<-as.factor(MS1$Jahr)
>
>
>
> MS1s <- MS1 %>%
>
> group_by(MS1$Jahr, MS1$Bio) %>%
>
> summarise(
>
> y0 = quantile(QI_A, 0.05),
>
> y25 = quantile(QI_A, 0.25),
>
> y50 = mean(QI_A),
>
> y75 = quantile(QI_A, 0.75),
>
> y100 = quantile(QI_A, 0.95))
>
>
>
> MS1s
>
> colnames(MS1s)[1]<-"Jahr"
>
> colnames(MS1s)[2]<-"Bio"
>
> MS1s
>
>
>
> p1<-ggplot(MS1s, aes(Jahr, fill = as.factor(Bio))) +
>
> geom_boxplot(
>
> aes(ymin = y0, lower = y25, middle = y50, upper = y75, ymax = y100),
>
> stat = "identity", notch=TRUE
>
> ) +
>
> theme(panel.background = element_blank())+
>
> theme(axis.line = element_line(colour = "black"))+
>
> theme(axis.text=element_text(size=18))+
>
> theme(axis.title=element_text(size=20))+
>
> ylab("Anteil BFF an LN [%]") +xlab("Jahr")+
>
> scale_color_manual(values=c("red","darkgreen"),
labels=c("?LN", "BIO"))+
>
> scale_fill_manual(values=c("red","darkgreen"),
labels= c("?LN", "BIO"))+
>
> theme(legend.title = element_blank())+
>
> theme(legend.text=element_text(size=20))
>
> p1<-p1 + expand_limits(y=c(0, 80))
>
> p1
>
>
> [[alternative HTML version deleted]]
>
>
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--
Dr. Benjamin Bolker
Professor, Mathematics & Statistics and Biology, McMaster University
Director, School of Computational Science and Engineering
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