Thank you everyone for the help. It is interesting that R sets a
character limit on each line, but I am glad the solution is simple.
core_contingency
On 7/13/22 07:42, Rui Barradas wrote:> Hello,
>
> The original command has spaces in it. If they are removed its total
> length goes down to 3649 bytes (or characters, in this case it's the
> same). With this length the command is expected to work without
> further worries. And it does, I have just tried it.
>
>
>
MES=c("A2M","ABRACL","ACADVL","ACAP2","ACTA2","ACTN1","ADAM19","ADAM9","ADAMTS5","ADGRE5","ADGRG6","AEBP1","AJUBA","ALDH1A3","AMMECR1","ANTXR1","ANXA1","ANXA2","ANXA5","ANXA6","APOE","APP","ARHGAP1","ARHGEF40","ARL1","ARL4A","ARMCX2","ARPC1B","ASPH","ATP10D","ATP1B1","ATP2B1","ATP2B4","ATP6V0E1","ATP8B2","ATXN1","B2M","BAG3","BGN","BMP5","BNC2","BOC","BTN3A2","C1orf198","C1orf54","C4orf32","C6orf120","CALD1","CALU","CAPN2","CAPN6","CBFB","CBLB","CCDC80","CD164","CD44","CD59","CD63","CDH11","CETN2","CFH","CFI","CILP","CKAP4","CLIC4","CMTM3","CMTM6","CNN3","COL11A1","COL12A1","COL1A1","COL27A1","COL3A1","COL4A1","COL4A2","COL5A1","COL5A2","COL6A1","COL6A2","COL6A3","COPA","CPED1","CPS1","CRABP2","CREB3L2","CREG1","CRELD2","CRISPLD1","CRTAP","CSRP1","CTDSP2","CTNNA1","CTSB","CTSC","CTSO","CXCL12","CYBRD1","CYFIP1","CYP26A1","CYR61","DCAF6","DDOST","DDR2","DESI2","DKK3","DLC1","DLX1","DLX2","DMD","DNAJC1","DNAJC10","DNAJC3","DNM3OS","DPY19L1","DSE","DUSP14","DUSP5","DUSP6","EDEM1","EDNRA","EFEMP2","EGFR","EGR1","EGR3","EHD2","ELAVL1","ELF1","ELK3","ELK4","EMILIN1","EMP1","ENAH","EPHA3","EPS8","ERBIN","ERLIN1","ERRFI1","ETS1","EVA1A","EXT1","EXTL2","F2R","F2RL2","FAM102B","FAM114A1","FAM120A","FAM129A","FAM3C","FAM43A","FAM46A","FAT1","FBN1","FBN2","FGFR1","FIBIN","FILIP1L","FKBP14","FLNA","FLRT2","FMOD","FN1","FNDC3B","FSTL1","FUCA2","FZD1","FZD2","FZD7","GABRR1","GALNT10","GAS1","GAS2","GDF15","GJA1","GNAI1","GNG12","GNS","GORAB","GPC6","GPR137B","GPX8","GRN","GSN","HES1","HEXB","HIBADH","HIPK3","HIST1H2AC","HIST1H2BK","HLA-A","HLA-B","HLA-C","HLA-F","HLX","HNMT","HOMER1","HS3ST3A1","HSP90B1","HSPA5","HSPB1","HTRA1","HYOU1","ID1","ID3","IFI16","IFITM2","IFITM3","IGF2R","IGFBP5","IGFBP6","IL13RA1","IL6ST","INSIG1","IQGAP2","ITGA10","ITGA4","ITGAV","ITGB1","ITM2B","ITM2C","ITPR1","ITPRIPL2","JAK1","JAM3","KANK2","KCNK2","KCTD12","KDELC2","KDELR2","KDELR3","KDM5B","KIAA1462","KIF13A","KIRREL","KLF10","KLF4","KLF6","L3HYPDH","LAMB1","LAMC1","LAMP1","LAPTM4A","LASP1","LATS2","LEPROT","LGALS1","LHFP","LHX8","LIFR","LIPA","LITAF","LIX1L","LMAN1","LMNA","LOXL2","LPP","LRP10","LRRC17","LRRC8C","LTBP1","LUZP1","MAGT1","MAML2","MAN2A1","MANF","MBD2","MBNL1","MBTPS1","MEOX1","MEOX2","MEST","MGAT2","MGP","MGST1","MICAL2","MMP2","MOB1A","MRC2","MXRA5","MYADM","MYDGF","MYL12A","MYL12B","MYLIP","NANS","NBR1","NEK7","NES","NFIA","NFIC","NID1","NID2","NOTCH2","NOTCH2NL","NPC2","NPTN","NQO1","NR3C1","NRP1","OGFRL1","OLFML2A","OLFML2B","OLFML3","OSTC","P4HA1","PALLD","PAPSS2","PCDH18","PCOLCE2","PCSK5","PDE3A","PDE7B","PDGFC","PDIA3","PDIA4","PDIA6","PDLIM1","PEA15","PEAK1","PHLDA3","PHLDB2","PHTF2","PIAS3","PLAGL1","PLEKHA2","PLEKHH2","PLK2","PLOD2","PLOD3","PLPP1","PLS3","PLSCR1","PLSCR4","PLXDC2","POLR2L","PON2","POSTN","PPIB","PPIC","PPT1","PRCP","PRDM6","PRDX4","PRDX6","PROM1","PRRX1","PTBP1","PTGER4","PTGFRN","PTN","PTPN14","PTPRG","PTPRK","PTRF","PXDC1","PXDN","PYGL","QKI","QSOX1","RAB13","RAB29","RAB31","RAP1A","RAP1B","RBMS1","RCN1","RECK","REST","RGL1","RGS10","RGS3","RHOC","RHOJ","RIN2","RIT1","RNFT1","RNH1","ROBO1","ROR1","RRBP1","S1PR3","SASH1","SCPEP1","SCRG1","SDC2","SDC4","SDCBP","SDF4","SEC14L1","SEL1L3","SEMA3C","SEMA3F","SEPT10","SERPINE2","SERPINH1","SFT2D1","SFT2D2","SGK1","SH3BGRL","SHC1","SHROOM3","SIX1","SIX4","SKIL","SLC16A4","SLC30A1","SLC30A7","SLC35F5","SLC38A2","SLC38A6","SLC39A14","SMAD3","SNAI2","SNAP23","SOSTDC1","SOX9","SPARC","SPARCL1","SPATA20","SPCS3","SPRED1","SPRY1","SPRY4","SPRY4-IT1","SQSTM1","SRPX","SSBP4","SSR1","SSR3","STAT1","STAT3","STEAP1","STK38L","SUCLG2","SURF4","SVIL","SYDE1","SYNJ2","SYPL1","TCF7L2","TFE3","TFPI","TGFB1I1","TGFBR2","THBS1","TIMP1","TJP1")
>
>
>
> Hope this helps,
>
> Rui Barradas
>
> ?s 14:50 de 13/07/2022, Richard O'Keefe escreveu:
>> Breaking up the *line* doesn't mean breaking up the *command*.
>> For example,
>> x <- c(
>> ???? "FOOBAR", # 1
>> ???? ...
>> ???? "FOOBAR", # 4999
>> ???? "UGGLE")
>> works fine, with source(..), with "R -f ...", and other ways.
>> Each *line* is short, but it's still one *command*.
>>
>> I'd probably put that much data in a file, myself,
>> but R doesn't mind.
>>
>>
>> On Thu, 14 Jul 2022 at 01:21, Ebert,Timothy Aaron <tebert at ufl.edu
>> <mailto:tebert at ufl.edu>> wrote:
>>
>> ??? The limits to the size of vectors, matrices, data frames, lists, or
>> ??? other data structure does not have a simple answer.
>> ??? 1) 2^31 - 1? is the maximum number of rows.
>>
https://stackoverflow.com/questions/5233769/practical-limits-of-r-data-frame#:~:text=The%20number%20is%202%5E31,start%20collecting%20several%20of%20them
>>
<https://stackoverflow.com/questions/5233769/practical-limits-of-r-data-frame#:~:text=The%20number%20is%202%5E31,start%20collecting%20several%20of%20them>.
>> ??? 2) help(Memory) suggests that the default limit for all variables
is
>> ??? 6 Mb. The help page tells you how to change this.
>> ??? Neither of these two factors have any bearing on this problem
except
>> ??? that your vector is not close to these limits.
>>
>> ??? I got the same result you did when I entered your vector into my
>> ??? system (R 4.2 in RStudio, on 64 bit Windows). I shortened it by
>> ??? removing the first entry and it works.
>>
>> ??? I can copy the entire line into Microsoft Word, and count the
number
>> ??? of characters (including spaces) and I get 4089. There were seven
>> ??? characters in the first entry including the comma and space. If I
>> ??? add seven spaces between MES and the equal sign I get the original
>> ??? outcome. So the limit is on the number of characters in the line.
>> ??? You can get more entries by shortening each entry, or fewer if each
>> ??? entry was longer.
>>
>> ??? As others have suggested, I would break the line into two pieces
and
>> ??? then combine the pieces.
>>
>> ??? Tim
>>
>>
>>
>> ??? -----Original Message-----
>> ??? From: R-help <r-help-bounces at r-project.org
>> ??? <mailto:r-help-bounces at r-project.org>> On Behalf Of Rui
Barradas
>> ??? Sent: Wednesday, July 13, 2022 6:36 AM
>> ??? To: core_contingency <ccontingency at gmail.com
>> ??? <mailto:ccontingency at gmail.com>>; r-help at
r-project.org
>> ??? <mailto:r-help at r-project.org>
>> ??? Subject: Re: [R] Does the function "c" have a character
limit?
>>
>> ??? [External Email]
>>
>> ??? Hello,
>>
>> ??? This is documented behavior.
>> ???? ?From R-intro, last line of section 1.8 [1].
>>
>>
>> ??? Command lines entered at the console are limited4 to about 4095
>> ??? bytes (not characters).
>>
>>
>> ??? The number 4 in limited4 is a footnote link:
>>
>>
>> ??? some of the consoles will not allow you to enter more, and amongst
>> ??? those which do some will silently discard the excess and some will
>> ??? use it as the start of the next line.
>>
>>
>>
>> ??? Prof. Ripley called the r-devel mailing list's attention to
this in
>> ??? August 2006 when the limit was 1024 [2], it was then increased to
>> ??? the current 4095. I remember seeing a limit of 2048 (?) but
couldn't
>> ??? find where.
>>
>>
>> ??? Try creating a file with your command as only content, then run
>>
>>
>> ??? x <- readLines("rhelp.txt")
>> ??? nchar(x)
>> ??? # [1] 4096
>>
>>
>> ??? You are above the limit by 1 byte.
>> ??? Standard solutions are to break the command line, in your case into
>> ??? at least 2 lines, or to source the command from file, like David
>> ??? proposed.
>>
>>
>> ??? [1]
>>
https://urldefense.proofpoint.com/v2/url?u=https-3A__cran.r-2Dproject.org_doc_manuals_R-2Dintro.html-23R-2Dcommands-5F003b-2Dcase-2Dsensitivity-2Detc&d=DwIDaQ&c=sJ6xIWYx-zLMB3EPkvcnVg&r=9PEhQh2kVeAsRzsn7AkP-g&m=bDsMNmn2OhMbQIvptul8Yl752vW7YkxJ0v91xFMGuYQo9NsNdzAp5k0CD2XzMc9x&s=g5cbrpfyHaIN9sXycd_-f2iDsOcbuzLe2u3KjvQNm-0&e>>
<https://urldefense.proofpoint.com/v2/url?u=https-3A__cran.r-2Dproject.org_doc_manuals_R-2Dintro.html-23R-2Dcommands-5F003b-2Dcase-2Dsensitivity-2Detc&d=DwIDaQ&c=sJ6xIWYx-zLMB3EPkvcnVg&r=9PEhQh2kVeAsRzsn7AkP-g&m=bDsMNmn2OhMbQIvptul8Yl752vW7YkxJ0v91xFMGuYQo9NsNdzAp5k0CD2XzMc9x&s=g5cbrpfyHaIN9sXycd_-f2iDsOcbuzLe2u3KjvQNm-0&e=>
>> ??? [2]
>>
https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_pipermail_r-2Ddevel_2006-2DAugust_038985.html&d=DwIDaQ&c=sJ6xIWYx-zLMB3EPkvcnVg&r=9PEhQh2kVeAsRzsn7AkP-g&m=bDsMNmn2OhMbQIvptul8Yl752vW7YkxJ0v91xFMGuYQo9NsNdzAp5k0CD2XzMc9x&s=B1YSca31vHlpy9WJG8o0MBTh7bX4v7M61eWfQ4tmdog&e>>
<https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_pipermail_r-2Ddevel_2006-2DAugust_038985.html&d=DwIDaQ&c=sJ6xIWYx-zLMB3EPkvcnVg&r=9PEhQh2kVeAsRzsn7AkP-g&m=bDsMNmn2OhMbQIvptul8Yl752vW7YkxJ0v91xFMGuYQo9NsNdzAp5k0CD2XzMc9x&s=B1YSca31vHlpy9WJG8o0MBTh7bX4v7M61eWfQ4tmdog&e=>
>>
>>
>> ??? Hope this helps,
>>
>> ??? Rui Barradas
>>
>>
>> ??? ?s 00:36 de 13/07/2022, core_contingency escreveu:
>> ???? > To Whom it May Concern,
>> ???? >
>> ???? > I am creating a vector with the base R function
"c", with many
>> ???? > arguments as shown below:
>> ???? >
>> ???? >? ? ? ?$ R
>> ???? >? ? ? ?> MES = c("A2M", "ABRACL",
"ACADVL", "ACAP2", "ACTA2",
>> ??? "ACTN1",
>> ???? > "ADAM19", "ADAM9", "ADAMTS5",
"ADGRE5", "ADGRG6", "AEBP1",
>> "AJUBA",
>> ???? > "ALDH1A3", "AMMECR1", "ANTXR1",
"ANXA1", "ANXA2", "ANXA5",
>> "ANXA6",
>> ???? > "APOE", "APP", "ARHGAP1",
"ARHGEF40", "ARL1", "ARL4A", "ARMCX2",
>> ???? > "ARPC1B", "ASPH", "ATP10D",
"ATP1B1", "ATP2B1", "ATP2B4",
>> ??? "ATP6V0E1",
>> ???? > "ATP8B2", "ATXN1", "B2M",
"BAG3", "BGN", "BMP5", "BNC2",
"BOC",
>> ???? > "BTN3A2", "C1orf198",
"C1orf54", "C4orf32", "C6orf120",
"CALD1",
>> ???? > "CALU", "CAPN2", "CAPN6",
"CBFB", "CBLB", "CCDC80", "CD164",
>> "CD44",
>> ???? > "CD59", "CD63", "CDH11",
"CETN2", "CFH", "CFI", "CILP",
"CKAP4",
>> ???? > "CLIC4", "CMTM3", "CMTM6",
"CNN3", "COL11A1", "COL12A1",
>> "COL1A1",
>> ???? > "COL27A1", "COL3A1", "COL4A1",
"COL4A2", "COL5A1", "COL5A2",
>> ??? "COL6A1",
>> ???? > "COL6A2", "COL6A3", "COPA",
"CPED1", "CPS1", "CRABP2", "CREB3L2",
>> ???? > "CREG1", "CRELD2", "CRISPLD1",
"CRTAP", "CSRP1", "CTDSP2",
>> "CTNNA1",
>> ???? > "CTSB", "CTSC", "CTSO",
"CXCL12", "CYBRD1", "CYFIP1", "CYP26A1",
>> ???? > "CYR61", "DCAF6", "DDOST",
"DDR2", "DESI2", "DKK3", "DLC1",
>> "DLX1",
>> ???? > "DLX2", "DMD", "DNAJC1",
"DNAJC10", "DNAJC3", "DNM3OS",
>> "DPY19L1",
>> ???? > "DSE", "DUSP14", "DUSP5",
"DUSP6", "EDEM1", "EDNRA", "EFEMP2",
>> ??? "EGFR",
>> ???? > "EGR1", "EGR3", "EHD2",
"ELAVL1", "ELF1", "ELK3", "ELK4",
>> "EMILIN1",
>> ???? > "EMP1", "ENAH", "EPHA3",
"EPS8", "ERBIN", "ERLIN1", "ERRFI1",
>> ??? "ETS1",
>> ???? > "EVA1A", "EXT1", "EXTL2",
"F2R", "F2RL2", "FAM102B", "FAM114A1",
>> ???? > "FAM120A", "FAM129A", "FAM3C",
"FAM43A", "FAM46A", "FAT1",
>> "FBN1",
>> ???? > "FBN2", "FGFR1", "FIBIN",
"FILIP1L", "FKBP14", "FLNA", "FLRT2",
>> ???? > "FMOD", "FN1", "FNDC3B",
"FSTL1", "FUCA2", "FZD1", "FZD2",
>> "FZD7",
>> ???? > "GABRR1", "GALNT10", "GAS1",
"GAS2", "GDF15", "GJA1", "GNAI1",
>> ???? > "GNG12", "GNS", "GORAB",
"GPC6", "GPR137B", "GPX8", "GRN",
"GSN",
>> ???? > "HES1", "HEXB", "HIBADH",
"HIPK3", "HIST1H2AC", "HIST1H2BK",
>> ??? "HLA-A",
>> ???? > "HLA-B", "HLA-C", "HLA-F",
"HLX", "HNMT", "HOMER1", "HS3ST3A1",
>> ???? > "HSP90B1", "HSPA5", "HSPB1",
"HTRA1", "HYOU1", "ID1", "ID3",
>> ??? "IFI16",
>> ???? > "IFITM2", "IFITM3", "IGF2R",
"IGFBP5", "IGFBP6", "IL13RA1",
>> "IL6ST",
>> ???? > "INSIG1", "IQGAP2", "ITGA10",
"ITGA4", "ITGAV", "ITGB1", "ITM2B",
>> ???? > "ITM2C", "ITPR1", "ITPRIPL2",
"JAK1", "JAM3", "KANK2", "KCNK2",
>> ???? > "KCTD12", "KDELC2", "KDELR2",
"KDELR3", "KDM5B", "KIAA1462",
>> ??? "KIF13A",
>> ???? > "KIRREL", "KLF10", "KLF4",
"KLF6", "L3HYPDH", "LAMB1", "LAMC1",
>> ???? > "LAMP1", "LAPTM4A", "LASP1",
"LATS2", "LEPROT", "LGALS1", "LHFP",
>> ???? > "LHX8", "LIFR", "LIPA",
"LITAF", "LIX1L", "LMAN1", "LMNA",
>> "LOXL2",
>> ???? > "LPP", "LRP10", "LRRC17",
"LRRC8C", "LTBP1", "LUZP1", "MAGT1",
>> ???? > "MAML2", "MAN2A1", "MANF",
"MBD2", "MBNL1", "MBTPS1", "MEOX1",
>> ???? > "MEOX2", "MEST", "MGAT2",
"MGP", "MGST1", "MICAL2", "MMP2",
>> "MOB1A",
>> ???? > "MRC2", "MXRA5", "MYADM",
"MYDGF", "MYL12A", "MYL12B", "MYLIP",
>> ???? > "NANS", "NBR1", "NEK7",
"NES", "NFIA", "NFIC", "NID1",
"NID2",
>> ???? > "NOTCH2", "NOTCH2NL", "NPC2",
"NPTN", "NQO1", "NR3C1", "NRP1",
>> ???? > "OGFRL1", "OLFML2A", "OLFML2B",
"OLFML3", "OSTC", "P4HA1",
>> "PALLD",
>> ???? > "PAPSS2", "PCDH18", "PCOLCE2",
"PCSK5", "PDE3A", "PDE7B",
>> "PDGFC",
>> ???? > "PDIA3", "PDIA4", "PDIA6",
"PDLIM1", "PEA15", "PEAK1", "PHLDA3",
>> ???? > "PHLDB2", "PHTF2", "PIAS3",
"PLAGL1", "PLEKHA2", "PLEKHH2",
>> "PLK2",
>> ???? > "PLOD2", "PLOD3", "PLPP1",
"PLS3", "PLSCR1", "PLSCR4", "PLXDC2",
>> ???? > "POLR2L", "PON2", "POSTN",
"PPIB", "PPIC", "PPT1", "PRCP",
>> "PRDM6",
>> ???? > "PRDX4", "PRDX6", "PROM1",
"PRRX1", "PTBP1", "PTGER4", "PTGFRN",
>> ???? > "PTN", "PTPN14", "PTPRG",
"PTPRK", "PTRF", "PXDC1", "PXDN",
>> "PYGL",
>> ???? > "QKI", "QSOX1", "RAB13",
"RAB29", "RAB31", "RAP1A", "RAP1B",
>> ??? "RBMS1",
>> ???? > "RCN1", "RECK", "REST",
"RGL1", "RGS10", "RGS3", "RHOC",
"RHOJ",
>> ???? > "RIN2", "RIT1", "RNFT1",
"RNH1", "ROBO1", "ROR1", "RRBP1",
>> "S1PR3",
>> ???? > "SASH1", "SCPEP1", "SCRG1",
"SDC2", "SDC4", "SDCBP", "SDF4",
>> ???? > "SEC14L1", "SEL1L3", "SEMA3C",
"SEMA3F", "SEPT10", "SERPINE2",
>> ???? > "SERPINH1", "SFT2D1", "SFT2D2",
"SGK1", "SH3BGRL", "SHC1",
>> ??? "SHROOM3",
>> ???? > "SIX1", "SIX4", "SKIL",
"SLC16A4", "SLC30A1", "SLC30A7",
>> "SLC35F5",
>> ???? > "SLC38A2", "SLC38A6",
"SLC39A14", "SMAD3", "SNAI2", "SNAP23",
>> ???? > "SOSTDC1", "SOX9", "SPARC",
"SPARCL1", "SPATA20", "SPCS3",
>> "SPRED1",
>> ???? > "SPRY1", "SPRY4", "SPRY4-IT1",
"SQSTM1", "SRPX", "SSBP4", "SSR1",
>> ???? > "SSR3", "STAT1", "STAT3",
"STEAP1", "STK38L", "SUCLG2", "SURF4",
>> ??? "SVIL", "SYDE1", "SYNJ2",
"SYPL1", "TCF7L2", "TFE3", "TFPI",
>> ??? "TGFB1I1", "TGFBR2", "THBS1",
"TIMP1", "TJP1")
>> ???? >? ? ? ?+
>> ???? >
>> ???? > For some reason, the R console does not display a
">" symbol,
>> ???? > indicating that it has completed the function, but displays a
"+"
>> ???? > symbol instead, which indicates that the function is still
>> ??? waiting for more input.
>> ???? > However, I believe that my syntax is correct. If I shorten my
>> ??? command
>> ???? > by a few characters by removing the last entry,
"TJP1":
>> ???? >
>> ???? >? ? ? ?$ R
>> ???? >? ? ? ?> MES = c("A2M", "ABRACL",
"ACADVL", "ACAP2", "ACTA2",
>> ??? "ACTN1",
>> ???? > "ADAM19", "ADAM9", "ADAMTS5",
"ADGRE5", "ADGRG6", "AEBP1",
>> "AJUBA",
>> ???? > "ALDH1A3", "AMMECR1", "ANTXR1",
"ANXA1", "ANXA2", "ANXA5",
>> "ANXA6",
>> ???? > "APOE", "APP", "ARHGAP1",
"ARHGEF40", "ARL1", "ARL4A", "ARMCX2",
>> ???? > "ARPC1B", "ASPH", "ATP10D",
"ATP1B1", "ATP2B1", "ATP2B4",
>> ??? "ATP6V0E1",
>> ???? > "ATP8B2", "ATXN1", "B2M",
"BAG3", "BGN", "BMP5", "BNC2",
"BOC",
>> ???? > "BTN3A2", "C1orf198",
"C1orf54", "C4orf32", "C6orf120",
"CALD1",
>> ???? > "CALU", "CAPN2", "CAPN6",
"CBFB", "CBLB", "CCDC80", "CD164",
>> "CD44",
>> ???? > "CD59", "CD63", "CDH11",
"CETN2", "CFH", "CFI", "CILP",
"CKAP4",
>> ???? > "CLIC4", "CMTM3", "CMTM6",
"CNN3", "COL11A1", "COL12A1",
>> "COL1A1",
>> ???? > "COL27A1", "COL3A1", "COL4A1",
"COL4A2", "COL5A1", "COL5A2",
>> ??? "COL6A1",
>> ???? > "COL6A2", "COL6A3", "COPA",
"CPED1", "CPS1", "CRABP2", "CREB3L2",
>> ???? > "CREG1", "CRELD2", "CRISPLD1",
"CRTAP", "CSRP1", "CTDSP2",
>> "CTNNA1",
>> ???? > "CTSB", "CTSC", "CTSO",
"CXCL12", "CYBRD1", "CYFIP1", "CYP26A1",
>> ???? > "CYR61", "DCAF6", "DDOST",
"DDR2", "DESI2", "DKK3", "DLC1",
>> "DLX1",
>> ???? > "DLX2", "DMD", "DNAJC1",
"DNAJC10", "DNAJC3", "DNM3OS",
>> "DPY19L1",
>> ???? > "DSE", "DUSP14", "DUSP5",
"DUSP6", "EDEM1", "EDNRA", "EFEMP2",
>> ??? "EGFR",
>> ???? > "EGR1", "EGR3", "EHD2",
"ELAVL1", "ELF1", "ELK3", "ELK4",
>> "EMILIN1",
>> ???? > "EMP1", "ENAH", "EPHA3",
"EPS8", "ERBIN", "ERLIN1", "ERRFI1",
>> ??? "ETS1",
>> ???? > "EVA1A", "EXT1", "EXTL2",
"F2R", "F2RL2", "FAM102B", "FAM114A1",
>> ???? > "FAM120A", "FAM129A", "FAM3C",
"FAM43A", "FAM46A", "FAT1",
>> "FBN1",
>> ???? > "FBN2", "FGFR1", "FIBIN",
"FILIP1L", "FKBP14", "FLNA", "FLRT2",
>> ???? > "FMOD", "FN1", "FNDC3B",
"FSTL1", "FUCA2", "FZD1", "FZD2",
>> "FZD7",
>> ???? > "GABRR1", "GALNT10", "GAS1",
"GAS2", "GDF15", "GJA1", "GNAI1",
>> ???? > "GNG12", "GNS", "GORAB",
"GPC6", "GPR137B", "GPX8", "GRN",
"GSN",
>> ???? > "HES1", "HEXB", "HIBADH",
"HIPK3", "HIST1H2AC", "HIST1H2BK",
>> ??? "HLA-A",
>> ???? > "HLA-B", "HLA-C", "HLA-F",
"HLX", "HNMT", "HOMER1", "HS3ST3A1",
>> ???? > "HSP90B1", "HSPA5", "HSPB1",
"HTRA1", "HYOU1", "ID1", "ID3",
>> ??? "IFI16",
>> ???? > "IFITM2", "IFITM3", "IGF2R",
"IGFBP5", "IGFBP6", "IL13RA1",
>> "IL6ST",
>> ???? > "INSIG1", "IQGAP2", "ITGA10",
"ITGA4", "ITGAV", "ITGB1", "ITM2B",
>> ???? > "ITM2C", "ITPR1", "ITPRIPL2",
"JAK1", "JAM3", "KANK2", "KCNK2",
>> ???? > "KCTD12", "KDELC2", "KDELR2",
"KDELR3", "KDM5B", "KIAA1462",
>> ??? "KIF13A",
>> ???? > "KIRREL", "KLF10", "KLF4",
"KLF6", "L3HYPDH", "LAMB1", "LAMC1",
>> ???? > "LAMP1", "LAPTM4A", "LASP1",
"LATS2", "LEPROT", "LGALS1", "LHFP",
>> ???? > "LHX8", "LIFR", "LIPA",
"LITAF", "LIX1L", "LMAN1", "LMNA",
>> "LOXL2",
>> ???? > "LPP", "LRP10", "LRRC17",
"LRRC8C", "LTBP1", "LUZP1", "MAGT1",
>> ???? > "MAML2", "MAN2A1", "MANF",
"MBD2", "MBNL1", "MBTPS1", "MEOX1",
>> ???? > "MEOX2", "MEST", "MGAT2",
"MGP", "MGST1", "MICAL2", "MMP2",
>> "MOB1A",
>> ???? > "MRC2", "MXRA5", "MYADM",
"MYDGF", "MYL12A", "MYL12B", "MYLIP",
>> ???? > "NANS", "NBR1", "NEK7",
"NES", "NFIA", "NFIC", "NID1",
"NID2",
>> ???? > "NOTCH2", "NOTCH2NL", "NPC2",
"NPTN", "NQO1", "NR3C1", "NRP1",
>> ???? > "OGFRL1", "OLFML2A", "OLFML2B",
"OLFML3", "OSTC", "P4HA1",
>> "PALLD",
>> ???? > "PAPSS2", "PCDH18", "PCOLCE2",
"PCSK5", "PDE3A", "PDE7B",
>> "PDGFC",
>> ???? > "PDIA3", "PDIA4", "PDIA6",
"PDLIM1", "PEA15", "PEAK1", "PHLDA3",
>> ???? > "PHLDB2", "PHTF2", "PIAS3",
"PLAGL1", "PLEKHA2", "PLEKHH2",
>> "PLK2",
>> ???? > "PLOD2", "PLOD3", "PLPP1",
"PLS3", "PLSCR1", "PLSCR4", "PLXDC2",
>> ???? > "POLR2L", "PON2", "POSTN",
"PPIB", "PPIC", "PPT1", "PRCP",
>> "PRDM6",
>> ???? > "PRDX4", "PRDX6", "PROM1",
"PRRX1", "PTBP1", "PTGER4", "PTGFRN",
>> ???? > "PTN", "PTPN14", "PTPRG",
"PTPRK", "PTRF", "PXDC1", "PXDN",
>> "PYGL",
>> ???? > "QKI", "QSOX1", "RAB13",
"RAB29", "RAB31", "RAP1A", "RAP1B",
>> ??? "RBMS1",
>> ???? > "RCN1", "RECK", "REST",
"RGL1", "RGS10", "RGS3", "RHOC",
"RHOJ",
>> ???? > "RIN2", "RIT1", "RNFT1",
"RNH1", "ROBO1", "ROR1", "RRBP1",
>> "S1PR3",
>> ???? > "SASH1", "SCPEP1", "SCRG1",
"SDC2", "SDC4", "SDCBP", "SDF4",
>> ???? > "SEC14L1", "SEL1L3", "SEMA3C",
"SEMA3F", "SEPT10", "SERPINE2",
>> ???? > "SERPINH1", "SFT2D1", "SFT2D2",
"SGK1", "SH3BGRL", "SHC1",
>> ??? "SHROOM3",
>> ???? > "SIX1", "SIX4", "SKIL",
"SLC16A4", "SLC30A1", "SLC30A7",
>> "SLC35F5",
>> ???? > "SLC38A2", "SLC38A6",
"SLC39A14", "SMAD3", "SNAI2", "SNAP23",
>> ???? > "SOSTDC1", "SOX9", "SPARC",
"SPARCL1", "SPATA20", "SPCS3",
>> "SPRED1",
>> ???? > "SPRY1", "SPRY4", "SPRY4-IT1",
"SQSTM1", "SRPX", "SSBP4", "SSR1",
>> ???? > "SSR3", "STAT1", "STAT3",
"STEAP1", "STK38L", "SUCLG2", "SURF4",
>> ??? "SVIL", "SYDE1", "SYNJ2",
"SYPL1", "TCF7L2", "TFE3", "TFPI",
>> ??? "TGFB1I1", "TGFBR2", "THBS1",
"TIMP1")
>> ???? >? ? ? ?>
>> ???? >
>> ???? > The function now works, and returns a ">"
symbol, indicating that
>> ??? the
>> ???? > function completed successfully. The ls() function proves it:
>> ???? >
>> ???? >? ? ? ?$ R
>> ???? >? ? ? ?> ls()
>> ???? >? ? ? ?[1] "MES"
>> ???? >
>> ???? > Is this a bug in the base R "c" function? It seems
like the "c"
>> ???? > function can only accept so many characters before it fails.
>> ???? >
>> ???? > Thank you for your time,
>> ???? > core_contingency
>> ???? >
>> ???? >
>> ???? > ______________________________________________
>> ???? > R-help at r-project.org <mailto:R-help at
r-project.org> mailing list
>> ??? -- To UNSUBSCRIBE and more, see
>> ???? >
>> https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mail
>>
<https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mail>
>> ???? >
>>
man_listinfo_r-2Dhelp&d=DwIDaQ&c=sJ6xIWYx-zLMB3EPkvcnVg&r=9PEhQh2kVeAs
>> ???? >
>>
Rzsn7AkP-g&m=bDsMNmn2OhMbQIvptul8Yl752vW7YkxJ0v91xFMGuYQo9NsNdzAp5k0CD
>> ???? >
2XzMc9x&s=x5SJbPFsoqRiJYh7Y5B0QDKio2Wy4Je38lBBi99AbAE&e>> ????
> PLEASE do read the posting guide
>> ???? >
>> https://urldefense.proofpoint.com/v2/url?u=http-3A__www.R-2Dproject.or
>>
<https://urldefense.proofpoint.com/v2/url?u=http-3A__www.R-2Dproject.or>
>> ???? >
>>
g_posting-2Dguide.html&d=DwIDaQ&c=sJ6xIWYx-zLMB3EPkvcnVg&r=9PEhQh2kVeA
>> ???? >
>>
sRzsn7AkP-g&m=bDsMNmn2OhMbQIvptul8Yl752vW7YkxJ0v91xFMGuYQo9NsNdzAp5k0C
>> ???? >
D2XzMc9x&s=lCG5D1ItMs8G_wkshvm4nBaVq4Ehy_zyq5mnp2zpt2Y&e>> ????
> and provide commented, minimal, self-contained, reproducible
>> code.
>>
>> ??? ______________________________________________
>> ??? R-help at r-project.org <mailto:R-help at r-project.org>
mailing list --
>> ??? To UNSUBSCRIBE and more, see
>>
https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_r-2Dhelp&d=DwIDaQ&c=sJ6xIWYx-zLMB3EPkvcnVg&r=9PEhQh2kVeAsRzsn7AkP-g&m=bDsMNmn2OhMbQIvptul8Yl752vW7YkxJ0v91xFMGuYQo9NsNdzAp5k0CD2XzMc9x&s=x5SJbPFsoqRiJYh7Y5B0QDKio2Wy4Je38lBBi99AbAE&e>>
<https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_r-2Dhelp&d=DwIDaQ&c=sJ6xIWYx-zLMB3EPkvcnVg&r=9PEhQh2kVeAsRzsn7AkP-g&m=bDsMNmn2OhMbQIvptul8Yl752vW7YkxJ0v91xFMGuYQo9NsNdzAp5k0CD2XzMc9x&s=x5SJbPFsoqRiJYh7Y5B0QDKio2Wy4Je38lBBi99AbAE&e=>
>> ??? PLEASE do read the posting guide
>>
https://urldefense.proofpoint.com/v2/url?u=http-3A__www.R-2Dproject.org_posting-2Dguide.html&d=DwIDaQ&c=sJ6xIWYx-zLMB3EPkvcnVg&r=9PEhQh2kVeAsRzsn7AkP-g&m=bDsMNmn2OhMbQIvptul8Yl752vW7YkxJ0v91xFMGuYQo9NsNdzAp5k0CD2XzMc9x&s=lCG5D1ItMs8G_wkshvm4nBaVq4Ehy_zyq5mnp2zpt2Y&e>>
<https://urldefense.proofpoint.com/v2/url?u=http-3A__www.R-2Dproject.org_posting-2Dguide.html&d=DwIDaQ&c=sJ6xIWYx-zLMB3EPkvcnVg&r=9PEhQh2kVeAsRzsn7AkP-g&m=bDsMNmn2OhMbQIvptul8Yl752vW7YkxJ0v91xFMGuYQo9NsNdzAp5k0CD2XzMc9x&s=lCG5D1ItMs8G_wkshvm4nBaVq4Ehy_zyq5mnp2zpt2Y&e=>
>> ??? and provide commented, minimal, self-contained, reproducible code.
>> ??? ______________________________________________
>> ??? R-help at r-project.org <mailto:R-help at r-project.org>
mailing list --
>> ??? To UNSUBSCRIBE and more, see
>> ??? https://stat.ethz.ch/mailman/listinfo/r-help
>> ??? <https://stat.ethz.ch/mailman/listinfo/r-help>
>> ??? PLEASE do read the posting guide
>> ??? http://www.R-project.org/posting-guide.html
>> ??? <http://www.R-project.org/posting-guide.html>
>> ??? and provide commented, minimal, self-contained, reproducible code.
>>
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