Dear R-help listers,
I am creating a package for a friend using his scripts and I run into a
problem when doing the check.
Inside a macro created with gtools::defmacro(par1, expr= ... there is a
call to stats::optim and the function for the optimization is called
.foo(), which is listed as one of the functions to be included in the
package, not to be documented, using package.skeleton. R CMD check
reports that it cannot find .foo(). This runs OK as a script but not as
a package. I believe it has to do with namespaces. The NAMESPACE file is
just this:
exportPattern("^[[:alpha:]]+")
importFrom("stats", "optim")
import(gtools)
importFrom("gtools", "defmacro")
Any help would be greatly appreciated
Ruben
--
Ruben H. Roa-Ureta, Ph. D.
Consultant, ORCID ID 0000-0002-9620-5224
Center for Environment and Water, Research Institute,
King Fahd University of Petroleum and Minerals,
KFUPM Box 1927, Dhahran 31261, Saudi Arabia
Office Phone : 966-3-860-7850
Cellular Phone : 966-540026401
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DISCLAIMER: The information in this email and its attach...{{dropped:11}}
Dear Ruben I do not think your export pattern matches .foo so that may be the problem. Michael On 05/03/2020 09:10, Ruben wrote:> Dear R-help listers, > > I am creating a package for a friend using his scripts and I run into a > problem when doing the check. > > Inside a macro created with gtools::defmacro(par1, expr= ... there is a > call to stats::optim and the function for the optimization is called > .foo(), which is listed as one of the functions to be included in the > package, not to be documented, using package.skeleton. R CMD check > reports that it cannot find .foo(). This runs OK as a script but not as > a package. I believe it has to do with namespaces. The NAMESPACE file is > just this: > > exportPattern("^[[:alpha:]]+") > importFrom("stats", "optim") > import(gtools) > importFrom("gtools", "defmacro") > > Any help would be greatly appreciated > > Ruben > > -- > Ruben H. Roa-Ureta, Ph. D. > Consultant, ORCID ID 0000-0002-9620-5224 > Center for Environment and Water, Research Institute, > King Fahd University of Petroleum and Minerals, > KFUPM Box 1927, Dhahran 31261, Saudi Arabia > Office Phone : 966-3-860-7850 > Cellular Phone : 966-540026401 > > ?? ????????? ??????? ?? ??? ?????? ?????????? ???????? (?? ????)? ?? > ???? ???? ?? ????? ???? ?? ??? ??????? ???? ???????? ?????? ??? ????? > ????????? ?? ????? ?????? ?????? ???? ?????? ???? ????. ??? ?? ???? ??? > ?? ??? ???? ?? ???????? ? ?? ??????? ?? ????????? ??? ??? ?? ????????? > ??? ??? ???. ?? ????? ????? ??? ??????? ???????? ?? ????? ??????? > ????????? ???? ??? ??????? ??? ??? ??????? ??? ???????. ??? ???????? ?? > ?????? ?????? ???? ?? ??? ??????? ?? ?????? ??? ???????? ??? ???? > ???????? ??? ??????? ???????. ??? ?? ????? ??????? ??????? ?? ????? ???? > ?? ??? ??????? ???? ?? ????? ?? ?????. > > DISCLAIMER: The information in this email and its attach...{{dropped:11}} > > ______________________________________________ > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. >-- Michael http://www.dewey.myzen.co.uk/home.html
... but this is the wrong list for such questions. Post on r-package-devel if you need further help. Bert Gunter "The trouble with having an open mind is that people keep coming along and sticking things into it." -- Opus (aka Berkeley Breathed in his "Bloom County" comic strip ) On Thu, Mar 5, 2020 at 1:15 AM Ruben <ruben at kfupm.edu.sa> wrote:> Dear R-help listers, > > I am creating a package for a friend using his scripts and I run into a > problem when doing the check. > > Inside a macro created with gtools::defmacro(par1, expr= ... there is a > call to stats::optim and the function for the optimization is called > .foo(), which is listed as one of the functions to be included in the > package, not to be documented, using package.skeleton. R CMD check > reports that it cannot find .foo(). This runs OK as a script but not as > a package. I believe it has to do with namespaces. The NAMESPACE file is > just this: > > exportPattern("^[[:alpha:]]+") > importFrom("stats", "optim") > import(gtools) > importFrom("gtools", "defmacro") > > Any help would be greatly appreciated > > Ruben > > -- > Ruben H. Roa-Ureta, Ph. D. > Consultant, ORCID ID 0000-0002-9620-5224 > Center for Environment and Water, Research Institute, > King Fahd University of Petroleum and Minerals, > KFUPM Box 1927, Dhahran 31261, Saudi Arabia > Office Phone : 966-3-860-7850 > Cellular Phone : 966-540026401 > > ?? ????????? ??????? ?? ??? ?????? ?????????? ???????? (?? ????)? ?? ???? > ???? ?? ????? ???? ?? ??? ??????? ???? ???????? ?????? ??? ????? ????????? > ?? ????? ?????? ?????? ???? ?????? ???? ????. ??? ?? ???? ??? ?? ??? ???? > ?? ???????? ? ?? ??????? ?? ????????? ??? ??? ?? ????????? ??? ??? ???. ?? > ????? ????? ??? ??????? ???????? ?? ????? ??????? ????????? ???? ??? > ??????? ??? ??? ??????? ??? ???????. ??? ???????? ?? ?????? ?????? ???? ?? > ??? ??????? ?? ?????? ??? ???????? ??? ???? ???????? ??? ??????? ???????. > ??? ?? ????? ??????? ??????? ?? ????? ???? ?? ??? ??????? ???? ?? ????? ?? > ?????. > > DISCLAIMER: The information in this email and its attach...{{dropped:11}} > > ______________________________________________ > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. >[[alternative HTML version deleted]]