Did you use 'R CMD ldd .../later.so', as I recommended? Bill Dunlap TIBCO Software wdunlap tibco.com On Wed, Feb 27, 2019 at 12:51 PM Rich Shepard <rshepard at appl-ecosys.com> wrote:> On Wed, 27 Feb 2019, William Dunlap wrote: > > > The package will not load. The only reason to do test load is to examine > > why the package's .so file cannot be loaded. We know there is at least > one > > function or data symbol that it cannot find, __atomic_fetch_add_8, which > > may be from boost::atomic. The ldd command may give some hints about > > missing libraries. > > Bill, > > Yes, it does. libR.so is not found: > # ldd later.so > linux-gate.so.1 (0xb76df000) > libR.so => not found > > However, R runs and libR.so is found here: > /usr/lib/R/lib/libR.so > and was last accessed > -rwxr-xr-x 1 root root 3331940 Dec 23 10:00 /usr/lib/R/lib/libR.so* > > Should I rebuild and reinstall R-3.5.2? > > Thanks again, > > Rich > > ______________________________________________ > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. >[[alternative HTML version deleted]]
On Wed, 27 Feb 2019, William Dunlap wrote:> Did you use 'R CMD ldd .../later.so', as I recommended?Bill, I ran ldd externally on /usr/lib/R/library/lib/later/later.so and posted the missing library. Just now I ran the above command and it did not find later.so: # R CMD ldd /usr/lib/R/library/later.so ldd: /usr/lib/R/library/later.so: No such file or directory Strange. And confusing to me. Regards, Rich
These two pathnames are different /usr/lib/R/library/lib/later/later.so /usr/lib/R/library/later.so Was that your intention? On Wed, Feb 27, 2019 at 11:45 PM Rich Shepard <rshepard at appl-ecosys.com> wrote:> On Wed, 27 Feb 2019, William Dunlap wrote: > > > Did you use 'R CMD ldd .../later.so', as I recommended? > > Bill, > > I ran ldd externally on /usr/lib/R/library/lib/later/later.so and posted > the > missing library. Just now I ran the above command and it did not find > later.so: > > # R CMD ldd /usr/lib/R/library/later.so > ldd: /usr/lib/R/library/later.so: No such file or directory > > Strange. And confusing to me. > > Regards, > > Rich > > ______________________________________________ > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. >[[alternative HTML version deleted]]