Martin Møller Skarbiniks Pedersen
2018-Jan-17 15:53 UTC
[R] Help making first dataset R package
Hi, I am trying to make my first R package containing only a single data.frame and documentation. All code can be found at: https://github.com/MartinMSPedersen/folkeafstemninger When I check the package I get four warnings. I will list all warnings in this email because they migth be connected. 1. * checking if this is a source package ... WARNING Subdirectory ?src? contains: convert_from_xml.R These are unlikely file names for src files. 2. * checking whether package ?folkeafstemninger? can be installed ... WARNING Found the following significant warnings: Warning: no source files found See ?/home/mm/gits/folkeafstemninger.Rcheck/00install.out? for details. 3. * checking package subdirectories ... WARNING Subdirectory ?data? contains no data sets. Subdirectory ?src? contains no source files. 4. * checking contents of ?data? directory ... WARNING Files not of a type allowed in a ?data? directory: ?folkeafstemninger.Rdata? Please use e.g. ?inst/extdata? for non-R data files The raw xml-files I used to create the data.frame is placed under raw/ The data.frame is saved as data/folkeafstemninger.RData and The R source I wrote to convert the xml-files is placed under src/ Thanks for any help. Regards Martin [[alternative HTML version deleted]]
I think this would fit better on the r-package-devel list. Cheers, Bert Bert Gunter "The trouble with having an open mind is that people keep coming along and sticking things into it." -- Opus (aka Berkeley Breathed in his "Bloom County" comic strip ) On Wed, Jan 17, 2018 at 7:53 AM, Martin M?ller Skarbiniks Pedersen < traxplayer at gmail.com> wrote:> Hi, > > I am trying to make my first R package containing only a single > data.frame and documentation. > > All code can be found at: > https://github.com/MartinMSPedersen/folkeafstemninger > > When I check the package I get four warnings. > I will list all warnings in this email because they migth be connected. > > 1. > * checking if this is a source package ... WARNING > Subdirectory ?src? contains: > convert_from_xml.R > These are unlikely file names for src files. > > 2. > * checking whether package ?folkeafstemninger? can be installed ... WARNING > Found the following significant warnings: > Warning: no source files found > See ?/home/mm/gits/folkeafstemninger.Rcheck/00install.out? for details. > > 3. > * checking package subdirectories ... WARNING > Subdirectory ?data? contains no data sets. > Subdirectory ?src? contains no source files. > > 4. > * checking contents of ?data? directory ... WARNING > Files not of a type allowed in a ?data? directory: > ?folkeafstemninger.Rdata? > Please use e.g. ?inst/extdata? for non-R data files > > > The raw xml-files I used to create the data.frame is placed under raw/ > The data.frame is saved as data/folkeafstemninger.RData > and > The R source I wrote to convert the xml-files is placed under src/ > > Thanks for any help. > > Regards > Martin > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/ > posting-guide.html > and provide commented, minimal, self-contained, reproducible code.[[alternative HTML version deleted]]
Dear Martin, 1 and 2. src is intended for C, C++ or Fortan files, not for R files. See https://cran.r-project.org/doc/manuals/r-release/R-exts.html#Non_002dR-scripts-in-packages. Either convert your script to a function and place it in the R folder or place the the script in inst/src. 3 and 4. Note that R is case sensitive. the extension should be .RData instead of Rdata. See https://cran.r-project.org/doc/manuals/r-release/R-exts.html#Data-in-packages Best regards, ir. Thierry Onkelinx Statisticus / Statistician Vlaamse Overheid / Government of Flanders INSTITUUT VOOR NATUUR- EN BOSONDERZOEK / RESEARCH INSTITUTE FOR NATURE AND FOREST Team Biometrie & Kwaliteitszorg / Team Biometrics & Quality Assurance thierry.onkelinx at inbo.be Havenlaan 88 bus 73, 1000 Brussel www.inbo.be /////////////////////////////////////////////////////////////////////////////////////////// To call in the statistician after the experiment is done may be no more than asking him to perform a post-mortem examination: he may be able to say what the experiment died of. ~ Sir Ronald Aylmer Fisher The plural of anecdote is not data. ~ Roger Brinner The combination of some data and an aching desire for an answer does not ensure that a reasonable answer can be extracted from a given body of data. ~ John Tukey /////////////////////////////////////////////////////////////////////////////////////////// 2018-01-17 16:53 GMT+01:00 Martin M?ller Skarbiniks Pedersen <traxplayer at gmail.com>:> Hi, > > I am trying to make my first R package containing only a single > data.frame and documentation. > > All code can be found at: > https://github.com/MartinMSPedersen/folkeafstemninger > > When I check the package I get four warnings. > I will list all warnings in this email because they migth be connected. > > 1. > * checking if this is a source package ... WARNING > Subdirectory ?src? contains: > convert_from_xml.R > These are unlikely file names for src files. > > 2. > * checking whether package ?folkeafstemninger? can be installed ... WARNING > Found the following significant warnings: > Warning: no source files found > See ?/home/mm/gits/folkeafstemninger.Rcheck/00install.out? for details. > > 3. > * checking package subdirectories ... WARNING > Subdirectory ?data? contains no data sets. > Subdirectory ?src? contains no source files. > > 4. > * checking contents of ?data? directory ... WARNING > Files not of a type allowed in a ?data? directory: > ?folkeafstemninger.Rdata? > Please use e.g. ?inst/extdata? for non-R data files > > > The raw xml-files I used to create the data.frame is placed under raw/ > The data.frame is saved as data/folkeafstemninger.RData > and > The R source I wrote to convert the xml-files is placed under src/ > > Thanks for any help. > > Regards > Martin > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code.