Dear R users
aim
Barplot of insect trap catches (y variable trapcatch) at one specific station
(variable FiBL_Hecke) from week 1-52 ( x variable week).
It works well using the function tapply (sum trapcatch per week, males and
females not separated), however, I intend to separate the y variable trapcatch
in males and females (variable m_w: m and w)
problem
I used the function "add" to merge two bar plots (males and females).
Unfortunately the second barplot masks the first barplot.
question
Is there a function to "mathematically" add the values from both
barplots with the aim the barplot presenting the total trap (males and females)
catches per week?
Hecke<-trap[trap$station=="FiBL_Hecke",] # station = Hecke
m<-Hecke[Hecke$m_w=="m",] # male trap catches
w<-Hecke[Hecke$m_w=="w",] # female trap catches
barplot(m$trapcatch, ylab="Y", space=0.5, col=c("grey0"),
ylim=c(0,450), las=2, cex.lab=0.9, cex.axis=0.9, cex.names=0.9)
barplot(w$trapcatch,space=0.5, add=TRUE, beside=FALSE,
col=c("grey50"), xaxt="n", yaxt="n")
Thanks a lot
Sibylle
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Hi, Sibylle, since you write '"mathematically" add', does barplot(rbind(m$trapcatch, w$trapcatch)) do what you want (modulo layout details)? Hth -- Gerrit --------------------------------------------------------------------- Dr. Gerrit Eichner Mathematical Institute, Room 212 gerrit.eichner at math.uni-giessen.de Justus-Liebig-University Giessen Tel: +49-(0)641-99-32104 Arndtstr. 2, 35392 Giessen, Germany Fax: +49-(0)641-99-32109 http://www.uni-giessen.de/eichner --------------------------------------------------------------------- Am 09.01.2018 um 09:19 schrieb Sibylle St?ckli:> Dear R users > > aim > Barplot of insect trap catches (y variable trapcatch) at one specific station (variable FiBL_Hecke) from week 1-52 ( x variable week). > It works well using the function tapply (sum trapcatch per week, males and females not separated), however, I intend to separate the y variable trapcatch in males and females (variable m_w: m and w) > > problem > I used the function "add" to merge two bar plots (males and females). Unfortunately the second barplot masks the first barplot. > > question > Is there a function to "mathematically" add the values from both barplots with the aim the barplot presenting the total trap (males and females) catches per week? > > > > Hecke<-trap[trap$station=="FiBL_Hecke",] # station = Hecke > m<-Hecke[Hecke$m_w=="m",] # male trap catches > w<-Hecke[Hecke$m_w=="w",] # female trap catches > > barplot(m$trapcatch, ylab="Y", space=0.5, col=c("grey0"), ylim=c(0,450), las=2, cex.lab=0.9, cex.axis=0.9, cex.names=0.9) > barplot(w$trapcatch,space=0.5, add=TRUE, beside=FALSE, col=c("grey50"), xaxt="n", yaxt="n") > > Thanks a lot > Sibylle > [[alternative HTML version deleted]] > > ______________________________________________ > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. >
Hi Sibylle,
I might have the wrong idea, but does this:
hecke<-matrix(sample(1:40,104,TRUE),nrow=2)
library(plotrix)
barp(hecke,col=c("lightblue","pink"))
legend(43,40,c("M","F"),fill=c("lightblue","pink"))
do what you want? It is also possible to display this as a nested bar
plot showing males and females within total catch.
Jim
On Tue, Jan 9, 2018 at 7:19 PM, Sibylle St?ckli <sibylle.stoeckli at
gmx.ch> wrote:> Dear R users
>
> aim
> Barplot of insect trap catches (y variable trapcatch) at one specific
station (variable FiBL_Hecke) from week 1-52 ( x variable week).
> It works well using the function tapply (sum trapcatch per week, males and
females not separated), however, I intend to separate the y variable trapcatch
in males and females (variable m_w: m and w)
>
> problem
> I used the function "add" to merge two bar plots (males and
females). Unfortunately the second barplot masks the first barplot.
>
> question
> Is there a function to "mathematically" add the values from both
barplots with the aim the barplot presenting the total trap (males and females)
catches per week?
>
>
>
> Hecke<-trap[trap$station=="FiBL_Hecke",] # station = Hecke
> m<-Hecke[Hecke$m_w=="m",] # male trap catches
> w<-Hecke[Hecke$m_w=="w",] # female trap catches
>
> barplot(m$trapcatch, ylab="Y", space=0.5,
col=c("grey0"), ylim=c(0,450), las=2, cex.lab=0.9, cex.axis=0.9,
cex.names=0.9)
> barplot(w$trapcatch,space=0.5, add=TRUE, beside=FALSE,
col=c("grey50"), xaxt="n", yaxt="n")
>
> Thanks a lot
> Sibylle
> [[alternative HTML version deleted]]
>
> ______________________________________________
> R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide
http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
Dear Gerrit
Thanks a lot. "rbind" seems to be the right function. Unfortunately
there is a shift in the x-axis (see pdf). There are 52 trapcatch values each, m
and w, but m$trapcatch and w$trapcatch are shifted up to x-value 60.
The follow-up lines for temp and humidity are fine.
Thanks
Sibylle
setwd("~/Desktop/DatenLogger2017") # am Mac sks
trap = read.delim("SWD_Trap_week-new.txt", na.strings="*",
header=TRUE)
climate = read.delim("Agrometeo_week-2017.txt",
na.strings="*", header=TRUE)
names(trap)
names(climate)
Hecke<-trap[trap$station=="FiBL_Hecke",]
m<-Hecke[Hecke$m_w=="m",]
w<-Hecke[Hecke$m_w=="w",]
par(mar=c(5,4,4,10))
barplot(rbind(m$trapcatch, w$trapcatch), ylim=c(0,350))
axis(1, 1:52)
par(new=T)
plot(climate$Week,climate$Frick_Temp.mittel, type="n", axes=F,
ylim=c(0,25), ylab="", xlab="", xaxt="n")
lines(climate$Week, climate$Frick_Temp.mittel, lty=2, lwd=2,
col="blue")
axis(4,las=1, cex.axis=0.8, col="blue")
mtext(side=4, line=2.5, "Mittlere Temperatur (?C)", cex=0.8,
col="blue")
par(new=T)
plot(climate$Week,climate$Frick_Feuchte.mittel, type="n", axes=F,
ylim=c(0,100), ylab="", xlab="", xaxt="n")
lines(climate$Week, climate$Frick_Feuchte.mittel, lty=2, lwd=2,
col="darkgreen")
axis(4,las=1, line=5.5, cex.axis=0.8, col="darkgreen")
mtext(side=4, line=7.5, "Mittlere Feuchte (%)", cex=0.8,
col="dark green")
Am 09.01.2018 um 09:30 schrieb Gerrit Eichner:
> Hi, Sibylle,
>
> since you write '"mathematically" add', does
>
> barplot(rbind(m$trapcatch, w$trapcatch))
>
> do what you want (modulo layout details)?
>
> Hth -- Gerrit
>
> ---------------------------------------------------------------------
> Dr. Gerrit Eichner Mathematical Institute, Room 212
> gerrit.eichner at math.uni-giessen.de Justus-Liebig-University Giessen
> Tel: +49-(0)641-99-32104 Arndtstr. 2, 35392 Giessen, Germany
> Fax: +49-(0)641-99-32109 http://www.uni-giessen.de/eichner
> ---------------------------------------------------------------------
>
> Am 09.01.2018 um 09:19 schrieb Sibylle St?ckli:
>> Dear R users
>> aim
>> Barplot of insect trap catches (y variable trapcatch) at one specific
station (variable FiBL_Hecke) from week 1-52 ( x variable week).
>> It works well using the function tapply (sum trapcatch per week, males
and females not separated), however, I intend to separate the y variable
trapcatch in males and females (variable m_w: m and w)
>> problem
>> I used the function "add" to merge two bar plots (males and
females). Unfortunately the second barplot masks the first barplot.
>> question
>> Is there a function to "mathematically" add the values from
both barplots with the aim the barplot presenting the total trap (males and
females) catches per week?
>> Hecke<-trap[trap$station=="FiBL_Hecke",] # station = Hecke
>> m<-Hecke[Hecke$m_w=="m",] # male trap catches
>> w<-Hecke[Hecke$m_w=="w",] # female trap catches
>> barplot(m$trapcatch, ylab="Y", space=0.5,
col=c("grey0"), ylim=c(0,450), las=2, cex.lab=0.9, cex.axis=0.9,
cex.names=0.9)
>> barplot(w$trapcatch,space=0.5, add=TRUE, beside=FALSE,
col=c("grey50"), xaxt="n", yaxt="n")
>> Thanks a lot
>> Sibylle
>> [[alternative HTML version deleted]]
>> ______________________________________________
>> R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see
>> https://stat.ethz.ch/mailman/listinfo/r-help
>> PLEASE do read the posting guide
http://www.R-project.org/posting-guide.html
>> and provide commented, minimal, self-contained, reproducible code.
>>
>
> ______________________________________________
> R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide
http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.