R help - Sep 2017 - comparition of occurrence of multiple variables between two dataframes

Yes of course, I can share this short view of the datas.

Here is the head() of data100, containing all the trees with a final value
higher than 100?:

CV11
CV12
CV13
CV14
CV15
CV21
CV22
CV23
CV24
CV25
CV26
CV31
CV32
CV33
CV41
CV42
CV43
CV44
CV51
CV52
IN11
IN12
IN13
1291
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1083
0
4
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
3919
0
0
0
0
0
0
0
0
0
0
0
2
0
0
0
0
0
0
0
0
0
0
0
14685
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
4021
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
5452
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0

IN14
IN21
IN22
IN23
IN31
IN32
IN33
IN34
BA11
BA12
BA21
DE11
DE12
DE13
DE14
DE15
GR11
GR12
GR13
GR21
GR22
GR31
GR32
1291
0
0
0
0
0
0
0
0
30
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1083
3
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
3919
0
0
1
0
2
0
0
0
2
0
0
0
3
0
0
0
0
0
0
11
0
0
0
14685
0
0
0
0
0
0
0
0
11
0
0
0
0
0
0
0
0
0
0
0
0
0
0
4021
0
0
0
0
0
0
0
0
11
0
0
0
0
0
0
0
0
0
0
0
0
0
0
5452
0
0
1
0
0
0
0
0
0
0
0
2
0
0
0
0
0
0
0
0
0
0
0

EP11
EP12
EP13
EP14
EP21
EP31
EP32
EP33
EP34
EP35
NE11
NE12
NE21
OT11
OT12
OT21
OT22
ecoval





1291
0
8
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1192





1083
0
8
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
424





3919
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
380





14685
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
370





4021
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
358





5452
0
0
0
0
0
0
1
0
0
11
0
0
0
0
1
0
0
356






The columns are the possible structures found on a tree (cavity, scar?)

And the same for the data0?:

CV11
CV12
CV13
CV14
CV15
CV21
CV22
CV23
CV24
CV25
CV26
CV31
CV32
CV33
CV41
CV42
CV43
CV44
CV51
CV52
IN11
IN12
IN13
4728
0
0
0
1
0
0
0
3
0
0
0
0
0
0
0
0
0
0
0
1
1
0
0
5339
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
11766
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
796
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
3561
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
10581
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0

IN14
IN21
IN22
IN23
IN31
IN32
IN33
IN34
BA11
BA12
BA21
DE11
DE12
DE13
DE14
DE15
GR11
GR12
GR13
GR21
GR22
GR31
GR32
4728
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
5339
1
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
11766
0
0
0
0
0
0
0
0
0
0
1
1
0
0
0
0
0
0
0
0
0
0
0
796
1
1
0
0
1
0
0
0
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
3561
0
0
0
0
0
0
0
0
3
0
0
0
0
0
0
0
0
0
0
0
0
0
0
10581
0
0
0
1
0
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
0
0

EP11
EP12
EP13
EP14
EP21
EP31
EP32
EP33
EP34
EP35
NE11
NE12
NE21
OT11
OT12
OT21
OT22
ecoval





4728
0
0
1
0
0
1
0
0
0
0
0
0
0
0
0
0
0
99





5339
0
1
0
0
0
0
1
0
0
0
0
0
0
0
0
0
0
99





11766
0
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
1
99





796
1
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
98





3561
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
0
98





10581
0
0
0
0
0
0
0
1
0
0
0
0
0
0
0
1
0
98







In short, the question is about to find a test to compare the occurrence of the
structures between the group higher than 100 and the group under 100.

Thank you for your help,
C.



Gesendet von Mail f?r Windows 10

Von: Suzen, Mehmet
Gesendet: mardi, 12 septembre 2017 13:24
An: C?line L?scher
Cc: r-help at r-project.org
Betreff: Re: [R] comparition of occurrence of multiple variables between two
dataframes

Do you have a simplified example with a code? It is not clear to me
what do you mean by tree but if you refer to tree data structure,
maybe you could change the data structure to tree
(https://cran.r-project.org/web/packages/data.tree/vignettes/data.tree.html)
and try to write comparison of two tree objects. It might be easier
that data.frame alone.

On 12 September 2017 at 12:27, C?line L?scher <c-luescher at hispeed.ch>
wrote:
> Hi everyone, I need your help to solve a problem with occurrence and two
dataframes.
> I have an excel table of 15200 lines. Each line correspond to a tree
analyzed for its structures. I have all the structures in columns (48
structures). The occurrence of these structures has been counted on every tree.
For example, the tree 12607 has 3 structures CV11, 1 structure IN12 and none (0)
of the rest of all the other structures. The very last column is the value given
to the tree, according to the structures found on it (each structure giving a
number of point to the tree by its presence on it).
> The question is: Are there some structures, or combination of structures,
which give a high value to the tree ? Of course, according to the value of each
structure, we can see which one has a higher value than the others (ex:
structure CV11 has a value of 15, structure IN12 has a value of 4). But what I
want to know is, if we take all the trees having a final value higher than 100
(we create a new dataframe "data100"), and we compare with the trees
having a final value under 100 (we create another dataframe "data0"),
can we find a significant difference in the number and occurrence of structures
found on these trees? And which structure is related to trees with a higher
value than 100 ?
> For now, I have only a visual answer to the question. I did two boxplot of
the data100 and data0, and I have seen some diff?rences : 2 structures are only
found in the data100, which can be caracteristic of a final value higher than
100. The problem is that I?m looking for a test to prove this.
> If you have any idea or proposition for solving this problem.. it will be
great!
> Best wishes,
> C.
>
>
> Gesendet von Mail f?r Windows 10
>
>
>         [[alternative HTML version deleted]]
>
> ______________________________________________
> R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide
http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.

	[[alternative HTML version deleted]]

Hi C?line,
Looks like you are looking for a statistical test between two sets of
distributions, such
as KS test, for example, generate histogram for each row in an identical
way and run KS test.
But if you are after simple difference you may use compare package (
https://cran.r-project.org/web/packages/compare/index.html).
Best,
-m
PS: Data is already plural :) datas does not exist.

On 12 September 2017 at 13:57, C?line L?scher <c-luescher at hispeed.ch>
wrote:
> Yes of course, I can share this short view of the datas.
>
>
>
> Here is the head() of data100, containing all the trees with a final value
> higher than 100 :
>
> CV11
>
> CV12
>
> CV13
>
> CV14
>
> CV15
>
> CV21
>
> CV22
>
> CV23
>
> CV24
>
> CV25
>
> CV26
>
> CV31
>
> CV32
>
> CV33
>
> CV41
>
> CV42
>
> CV43
>
> CV44
>
> CV51
>
> CV52
>
> IN11
>
> IN12
>
> IN13
>
> 1291
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1083
>
> 0
>
> 4
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 3919
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 2
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 14685
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 4021
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 5452
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> IN14
>
> IN21
>
> IN22
>
> IN23
>
> IN31
>
> IN32
>
> IN33
>
> IN34
>
> BA11
>
> BA12
>
> BA21
>
> DE11
>
> DE12
>
> DE13
>
> DE14
>
> DE15
>
> GR11
>
> GR12
>
> GR13
>
> GR21
>
> GR22
>
> GR31
>
> GR32
>
> 1291
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 30
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1083
>
> 3
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 3919
>
> 0
>
> 0
>
> 1
>
> 0
>
> 2
>
> 0
>
> 0
>
> 0
>
> 2
>
> 0
>
> 0
>
> 0
>
> 3
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 11
>
> 0
>
> 0
>
> 0
>
> 14685
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 11
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 4021
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 11
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 5452
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 2
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> EP11
>
> EP12
>
> EP13
>
> EP14
>
> EP21
>
> EP31
>
> EP32
>
> EP33
>
> EP34
>
> EP35
>
> NE11
>
> NE12
>
> NE21
>
> OT11
>
> OT12
>
> OT21
>
> OT22
>
> ecoval
>
> 1291
>
> 0
>
> 8
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1192
>
> 1083
>
> 0
>
> 8
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 424
>
> 3919
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 380
>
> 14685
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 370
>
> 4021
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 358
>
> 5452
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 11
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 356
>
>
>
> The columns are the possible structures found on a tree (cavity, scar?)
>
>
>
> And the same for the data0 :
>
> CV11
>
> CV12
>
> CV13
>
> CV14
>
> CV15
>
> CV21
>
> CV22
>
> CV23
>
> CV24
>
> CV25
>
> CV26
>
> CV31
>
> CV32
>
> CV33
>
> CV41
>
> CV42
>
> CV43
>
> CV44
>
> CV51
>
> CV52
>
> IN11
>
> IN12
>
> IN13
>
> 4728
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 3
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 1
>
> 0
>
> 0
>
> 5339
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 11766
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 796
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 3561
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 10581
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> IN14
>
> IN21
>
> IN22
>
> IN23
>
> IN31
>
> IN32
>
> IN33
>
> IN34
>
> BA11
>
> BA12
>
> BA21
>
> DE11
>
> DE12
>
> DE13
>
> DE14
>
> DE15
>
> GR11
>
> GR12
>
> GR13
>
> GR21
>
> GR22
>
> GR31
>
> GR32
>
> 4728
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 5339
>
> 1
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 11766
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 796
>
> 1
>
> 1
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 3561
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 3
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 10581
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> EP11
>
> EP12
>
> EP13
>
> EP14
>
> EP21
>
> EP31
>
> EP32
>
> EP33
>
> EP34
>
> EP35
>
> NE11
>
> NE12
>
> NE21
>
> OT11
>
> OT12
>
> OT21
>
> OT22
>
> ecoval
>
> 4728
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 99
>
> 5339
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 99
>
> 11766
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 99
>
> 796
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 98
>
> 3561
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 98
>
> 10581
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 98
>
>
>
>
>
> In short, the question is about to find a test to compare the occurrence
> of the structures between the group higher than 100 and the group under
100.
>
>
>
> Thank you for your help,
>
> C.
>
>
>
>
>
>
>
> Gesendet von Mail <https://go.microsoft.com/fwlink/?LinkId=550986>
f?r
> Windows 10
>
>
>
> *Von: *Suzen, Mehmet <msuzen at gmail.com>
> *Gesendet: *mardi, 12 septembre 2017 13:24
> *An: *C?line L?scher <c-luescher at hispeed.ch>
> *Cc: *r-help at r-project.org
> *Betreff: *Re: [R] comparition of occurrence of multiple variables
> between two dataframes
>
>
>
> Do you have a simplified example with a code? It is not clear to me
>
> what do you mean by tree but if you refer to tree data structure,
>
> maybe you could change the data structure to tree
>
> (https://cran.r-project.org/web/packages/data.tree/
> vignettes/data.tree.html)
>
> and try to write comparison of two tree objects. It might be easier
>
> that data.frame alone.
>
>
>
> On 12 September 2017 at 12:27, C?line L?scher <c-luescher at
hispeed.ch>
> wrote:
>
> > Hi everyone, I need your help to solve a problem with occurrence and
two
> dataframes.
>
> > I have an excel table of 15200 lines. Each line correspond to a tree
> analyzed for its structures. I have all the structures in columns (48
> structures). The occurrence of these structures has been counted on every
> tree. For example, the tree 12607 has 3 structures CV11, 1 structure IN12
> and none (0) of the rest of all the other structures. The very last column
> is the value given to the tree, according to the structures found on it
> (each structure giving a number of point to the tree by its presence on
it).
>
> > The question is: Are there some structures, or combination of
> structures, which give a high value to the tree ? Of course, according to
> the value of each structure, we can see which one has a higher value than
> the others (ex: structure CV11 has a value of 15, structure IN12 has a
> value of 4). But what I want to know is, if we take all the trees having a
> final value higher than 100 (we create a new dataframe
"data100"), and we
> compare with the trees having a final value under 100 (we create another
> dataframe "data0"), can we find a significant difference in the
number and
> occurrence of structures found on these trees? And which structure is
> related to trees with a higher value than 100 ?
>
> > For now, I have only a visual answer to the question. I did two
boxplot
> of the data100 and data0, and I have seen some diff?rences : 2 structures
> are only found in the data100, which can be caracteristic of a final value
> higher than 100. The problem is that I?m looking for a test to prove this.
>
> > If you have any idea or proposition for solving this problem.. it will
> be great!
>
> > Best wishes,
>
> > C.
>
> >
>
> >
>
> > Gesendet von Mail f?r Windows 10
>
> >
>
> >
>
> >         [[alternative HTML version deleted]]
>
> >
>
> > ______________________________________________
>
> > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see
>
> > https://stat.ethz.ch/mailman/listinfo/r-help
>
> > PLEASE do read the posting guide http://www.R-project.org/
> posting-guide.html
>
> > and provide commented, minimal, self-contained, reproducible code.
>
>
>
	[[alternative HTML version deleted]]

You need to learn how to send plain text messages. See below what happened to
your html table when the list converted it to plain text. It is unreadable.

In your original post, you say "The very last column is the value given to
the tree, according to the structures found on it (each structure giving a
number of point to the tree by its presence on it)."

That suggests that the point value is based on the structures. If that is so the
answer to your question is "yes", higher point values will have
different numbers/combinations of structures because you computed point value
from the structures. No statistical test between the two groups will be valid
because the groups were not formed independently of the structures.

Looking for associations between different types of structures would be a
different question that would not be based on point value at all but would use
some measure of association/correlation.

----------------------------------------
David L Carlson
Department of Anthropology
Texas A&M University
College Station, TX 77843-4352

-----Original Message-----
From: R-help [mailto:r-help-bounces at r-project.org] On Behalf Of Suzen, Mehmet
Sent: Tuesday, September 12, 2017 7:11 AM
To: C?line L?scher <c-luescher at hispeed.ch>
Cc: r-help at r-project.org
Subject: Re: [R] comparition of occurrence of multiple variables between two
dataframes

Hi C?line,
Looks like you are looking for a statistical test between two sets of
distributions, such as KS test, for example, generate histogram for each row in
an identical way and run KS test.
But if you are after simple difference you may use compare package (
https://cran.r-project.org/web/packages/compare/index.html).
Best,
-m
PS: Data is already plural :) datas does not exist.

On 12 September 2017 at 13:57, C?line L?scher <c-luescher at hispeed.ch>
wrote:
> Yes of course, I can share this short view of the datas.
>
>
>
> Here is the head() of data100, containing all the trees with a final 
> value higher than 100 :
>
> CV11
>
> CV12
>
> CV13
>
> CV14
>
> CV15
>
> CV21
>
> CV22
>
> CV23
>
> CV24
>
> CV25
>
> CV26
>
> CV31
>
> CV32
>
> CV33
>
> CV41
>
> CV42
>
> CV43
>
> CV44
>
> CV51
>
> CV52
>
> IN11
>
> IN12
>
> IN13
>
> 1291
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1083
>
> 0
>
> 4
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 3919
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 2
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 14685
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 4021
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 5452
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> IN14
>
> IN21
>
> IN22
>
> IN23
>
> IN31
>
> IN32
>
> IN33
>
> IN34
>
> BA11
>
> BA12
>
> BA21
>
> DE11
>
> DE12
>
> DE13
>
> DE14
>
> DE15
>
> GR11
>
> GR12
>
> GR13
>
> GR21
>
> GR22
>
> GR31
>
> GR32
>
> 1291
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 30
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1083
>
> 3
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 3919
>
> 0
>
> 0
>
> 1
>
> 0
>
> 2
>
> 0
>
> 0
>
> 0
>
> 2
>
> 0
>
> 0
>
> 0
>
> 3
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 11
>
> 0
>
> 0
>
> 0
>
> 14685
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 11
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 4021
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 11
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 5452
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 2
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> EP11
>
> EP12
>
> EP13
>
> EP14
>
> EP21
>
> EP31
>
> EP32
>
> EP33
>
> EP34
>
> EP35
>
> NE11
>
> NE12
>
> NE21
>
> OT11
>
> OT12
>
> OT21
>
> OT22
>
> ecoval
>
> 1291
>
> 0
>
> 8
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1192
>
> 1083
>
> 0
>
> 8
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 424
>
> 3919
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 380
>
> 14685
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 370
>
> 4021
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 358
>
> 5452
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 11
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 356
>
>
>
> The columns are the possible structures found on a tree (cavity, 
> scar?)
>
>
>
> And the same for the data0 :
>
> CV11
>
> CV12
>
> CV13
>
> CV14
>
> CV15
>
> CV21
>
> CV22
>
> CV23
>
> CV24
>
> CV25
>
> CV26
>
> CV31
>
> CV32
>
> CV33
>
> CV41
>
> CV42
>
> CV43
>
> CV44
>
> CV51
>
> CV52
>
> IN11
>
> IN12
>
> IN13
>
> 4728
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 3
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 1
>
> 0
>
> 0
>
> 5339
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 11766
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 796
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 3561
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 10581
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> IN14
>
> IN21
>
> IN22
>
> IN23
>
> IN31
>
> IN32
>
> IN33
>
> IN34
>
> BA11
>
> BA12
>
> BA21
>
> DE11
>
> DE12
>
> DE13
>
> DE14
>
> DE15
>
> GR11
>
> GR12
>
> GR13
>
> GR21
>
> GR22
>
> GR31
>
> GR32
>
> 4728
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 5339
>
> 1
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 11766
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 796
>
> 1
>
> 1
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 3561
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 3
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 10581
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> EP11
>
> EP12
>
> EP13
>
> EP14
>
> EP21
>
> EP31
>
> EP32
>
> EP33
>
> EP34
>
> EP35
>
> NE11
>
> NE12
>
> NE21
>
> OT11
>
> OT12
>
> OT21
>
> OT22
>
> ecoval
>
> 4728
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 99
>
> 5339
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 99
>
> 11766
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 99
>
> 796
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 98
>
> 3561
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 98
>
> 10581
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 0
>
> 1
>
> 0
>
> 98
>
>
>
>
>
> In short, the question is about to find a test to compare the 
> occurrence of the structures between the group higher than 100 and the
group under 100.
>
>
>
> Thank you for your help,
>
> C.
>
>
>
>
>
>
>
> Gesendet von Mail <https://go.microsoft.com/fwlink/?LinkId=550986>
f?r
> Windows 10
>
>
>
> *Von: *Suzen, Mehmet <msuzen at gmail.com>
> *Gesendet: *mardi, 12 septembre 2017 13:24
> *An: *C?line L?scher <c-luescher at hispeed.ch>
> *Cc: *r-help at r-project.org
> *Betreff: *Re: [R] comparition of occurrence of multiple variables 
> between two dataframes
>
>
>
> Do you have a simplified example with a code? It is not clear to me
>
> what do you mean by tree but if you refer to tree data structure,
>
> maybe you could change the data structure to tree
>
> (https://cran.r-project.org/web/packages/data.tree/
> vignettes/data.tree.html)
>
> and try to write comparison of two tree objects. It might be easier
>
> that data.frame alone.
>
>
>
> On 12 September 2017 at 12:27, C?line L?scher <c-luescher at
hispeed.ch>
> wrote:
>
> > Hi everyone, I need your help to solve a problem with occurrence and 
> > two
> dataframes.
>
> > I have an excel table of 15200 lines. Each line correspond to a tree
> analyzed for its structures. I have all the structures in columns (48 
> structures). The occurrence of these structures has been counted on 
> every tree. For example, the tree 12607 has 3 structures CV11, 1 
> structure IN12 and none (0) of the rest of all the other structures. 
> The very last column is the value given to the tree, according to the 
> structures found on it (each structure giving a number of point to the tree
by its presence on it).
>
> > The question is: Are there some structures, or combination of
> structures, which give a high value to the tree ? Of course, according 
> to the value of each structure, we can see which one has a higher 
> value than the others (ex: structure CV11 has a value of 15, structure 
> IN12 has a value of 4). But what I want to know is, if we take all the 
> trees having a final value higher than 100 (we create a new dataframe 
> "data100"), and we compare with the trees having a final value
under
> 100 (we create another dataframe "data0"), can we find a
significant
> difference in the number and occurrence of structures found on these 
> trees? And which structure is related to trees with a higher value than 100
?
>
> > For now, I have only a visual answer to the question. I did two 
> > boxplot
> of the data100 and data0, and I have seen some diff?rences : 2 
> structures are only found in the data100, which can be caracteristic 
> of a final value higher than 100. The problem is that I?m looking for a
test to prove this.
>
> > If you have any idea or proposition for solving this problem.. it 
> > will
> be great!
>
> > Best wishes,
>
> > C.
>
> >
>
> >
>
> > Gesendet von Mail f?r Windows 10
>
> >
>
> >
>
> >         [[alternative HTML version deleted]]
>
> >
>
> > ______________________________________________
>
> > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see
>
> > https://stat.ethz.ch/mailman/listinfo/r-help
>
> > PLEASE do read the posting guide http://www.R-project.org/
> posting-guide.html
>
> > and provide commented, minimal, self-contained, reproducible code.
>
>
>
	[[alternative HTML version deleted]]

______________________________________________
R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.

Hi

Instead of posting head(data100) try to copy output of

dput(head(data100))

directly to your post.

This can show us your exact data together with their modes.

And switch to plain text emails, HTML formating results in quite messy mails.

Cheers
Petr

> -----Original Message-----
> From: R-help [mailto:r-help-bounces at r-project.org] On Behalf Of C?line
> L?scher
> Sent: Tuesday, September 12, 2017 1:58 PM
> To: Suzen, Mehmet <msuzen at gmail.com>
> Cc: r-help at r-project.org
> Subject: Re: [R] comparition of occurrence of multiple variables between
two
> dataframes
>
> Yes of course, I can share this short view of the datas.
>
> Here is the head() of data100, containing all the trees with a final value
higher
> than 100 :
>
> CV11
> CV12
> CV13
> CV14
> CV15
> CV21
> CV22
> CV23
> CV24
> CV25
> CV26
> CV31
> CV32
> CV33
> CV41
> CV42
> CV43
> CV44
> CV51
> CV52
> IN11
> IN12
> IN13
> 1291
> 0
> 0
> 0
> 1
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 1083
> 0
> 4
> 0
> 1
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 3919
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 2
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 14685
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 1
> 0
> 0
> 4021
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 1
> 0
> 0
> 5452
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
>
> IN14
> IN21
> IN22
> IN23
> IN31
> IN32
> IN33
> IN34
> BA11
> BA12
> BA21
> DE11
> DE12
> DE13
> DE14
> DE15
> GR11
> GR12
> GR13
> GR21
> GR22
> GR31
> GR32
> 1291
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 30
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 1083
> 3
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 3919
> 0
> 0
> 1
> 0
> 2
> 0
> 0
> 0
> 2
> 0
> 0
> 0
> 3
> 0
> 0
> 0
> 0
> 0
> 0
> 11
> 0
> 0
> 0
> 14685
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 11
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 4021
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 11
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 5452
> 0
> 0
> 1
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 2
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
>
> EP11
> EP12
> EP13
> EP14
> EP21
> EP31
> EP32
> EP33
> EP34
> EP35
> NE11
> NE12
> NE21
> OT11
> OT12
> OT21
> OT22
> ecoval
>
>
>
>
>
> 1291
> 0
> 8
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 1192
>
>
>
>
>
> 1083
> 0
> 8
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 424
>
>
>
>
>
> 3919
> 1
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 380
>
>
>
>
>
> 14685
> 0
> 1
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 370
>
>
>
>
>
> 4021
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 1
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 358
>
>
>
>
>
> 5452
> 0
> 0
> 0
> 0
> 0
> 0
> 1
> 0
> 0
> 11
> 0
> 0
> 0
> 0
> 1
> 0
> 0
> 356
>
>
>
>
> The columns are the possible structures found on a tree (cavity, scar?)
>
> And the same for the data0 :
>
> CV11
> CV12
> CV13
> CV14
> CV15
> CV21
> CV22
> CV23
> CV24
> CV25
> CV26
> CV31
> CV32
> CV33
> CV41
> CV42
> CV43
> CV44
> CV51
> CV52
> IN11
> IN12
> IN13
> 4728
> 0
> 0
> 0
> 1
> 0
> 0
> 0
> 3
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 1
> 1
> 0
> 0
> 5339
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 1
> 0
> 0
> 11766
> 0
> 0
> 0
> 0
> 0
> 0
> 1
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 796
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 3561
> 0
> 0
> 0
> 1
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 1
> 0
> 0
> 0
> 0
> 10581
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 1
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
>
> IN14
> IN21
> IN22
> IN23
> IN31
> IN32
> IN33
> IN34
> BA11
> BA12
> BA21
> DE11
> DE12
> DE13
> DE14
> DE15
> GR11
> GR12
> GR13
> GR21
> GR22
> GR31
> GR32
> 4728
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 1
> 0
> 0
> 0
> 0
> 0
> 0
> 5339
> 1
> 0
> 1
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 1
> 0
> 0
> 0
> 0
> 0
> 0
> 11766
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 1
> 1
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 796
> 1
> 1
> 0
> 0
> 1
> 0
> 0
> 0
> 1
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 3561
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 3
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 10581
> 0
> 0
> 0
> 1
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 1
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
>
> EP11
> EP12
> EP13
> EP14
> EP21
> EP31
> EP32
> EP33
> EP34
> EP35
> NE11
> NE12
> NE21
> OT11
> OT12
> OT21
> OT22
> ecoval
>
>
>
>
>
> 4728
> 0
> 0
> 1
> 0
> 0
> 1
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 99
>
>
>
>
>
> 5339
> 0
> 1
> 0
> 0
> 0
> 0
> 1
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 99
>
>
>
>
>
> 11766
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 1
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 1
> 99
>
>
>
>
>
> 796
> 1
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 98
>
>
>
>
>
> 3561
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 98
>
>
>
>
>
> 10581
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 1
> 0
> 0
> 0
> 0
> 0
> 0
> 0
> 1
> 0
> 98
>
>
>
>
>
> In short, the question is about to find a test to compare the occurrence of
the
> structures between the group higher than 100 and the group under 100.
>
> Thank you for your help,
> C.
>
>
>
> Gesendet von Mail f?r Windows 10
>
> Von: Suzen, Mehmet
> Gesendet: mardi, 12 septembre 2017 13:24
> An: C?line L?scher
> Cc: r-help at r-project.org
> Betreff: Re: [R] comparition of occurrence of multiple variables between
two
> dataframes
>
> Do you have a simplified example with a code? It is not clear to me what do
> you mean by tree but if you refer to tree data structure, maybe you could
> change the data structure to tree
>
(https://cran.r-project.org/web/packages/data.tree/vignettes/data.tree.html)
> and try to write comparison of two tree objects. It might be easier that
> data.frame alone.
>
> On 12 September 2017 at 12:27, C?line L?scher <c-luescher at
hispeed.ch>
> wrote:
> > Hi everyone, I need your help to solve a problem with occurrence and
two
> dataframes.
> > I have an excel table of 15200 lines. Each line correspond to a tree
analyzed
> for its structures. I have all the structures in columns (48 structures).
The
> occurrence of these structures has been counted on every tree. For example,
> the tree 12607 has 3 structures CV11, 1 structure IN12 and none (0) of the
rest
> of all the other structures. The very last column is the value given to the
tree,
> according to the structures found on it (each structure giving a number of
point
> to the tree by its presence on it).
> > The question is: Are there some structures, or combination of
structures,
> which give a high value to the tree ? Of course, according to the value of
each
> structure, we can see which one has a higher value than the others (ex:
> structure CV11 has a value of 15, structure IN12 has a value of 4). But
what I
> want to know is, if we take all the trees having a final value higher than
100
> (we create a new dataframe "data100"), and we compare with the
trees having
> a final value under 100 (we create another dataframe "data0"),
can we find a
> significant difference in the number and occurrence of structures found on
> these trees? And which structure is related to trees with a higher value
than
> 100 ?
> > For now, I have only a visual answer to the question. I did two
boxplot of the
> data100 and data0, and I have seen some diff?rences : 2 structures are only
> found in the data100, which can be caracteristic of a final value higher
than
> 100. The problem is that I?m looking for a test to prove this.
> > If you have any idea or proposition for solving this problem.. it will
be great!
> > Best wishes,
> > C.
> >
> >
> > Gesendet von Mail f?r Windows 10
> >
> >
> >         [[alternative HTML version deleted]]
> >
> > ______________________________________________
> > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see
> > https://stat.ethz.ch/mailman/listinfo/r-help
> > PLEASE do read the posting guide
> > http://www.R-project.org/posting-guide.html
> > and provide commented, minimal, self-contained, reproducible code.
>
>
>       [[alternative HTML version deleted]]
>
> ______________________________________________
> R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide
http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
________________________________
Tento e-mail a jak?koliv k n?mu p?ipojen? dokumenty jsou d?v?rn? a jsou ur?eny
pouze jeho adres?t?m.
Jestli?e jste obdr?el(a) tento e-mail omylem, informujte laskav? neprodlen? jeho
odes?latele. Obsah tohoto emailu i s p??lohami a jeho kopie vyma?te ze sv?ho
syst?mu.
Nejste-li zam??len?m adres?tem tohoto emailu, nejste opr?vn?ni tento email
jakkoliv u??vat, roz?i?ovat, kop?rovat ?i zve?ej?ovat.
Odes?latel e-mailu neodpov?d? za eventu?ln? ?kodu zp?sobenou modifikacemi ?i
zpo?d?n?m p?enosu e-mailu.

V p??pad?, ?e je tento e-mail sou??st? obchodn?ho jedn?n?:
- vyhrazuje si odes?latel pr?vo ukon?it kdykoliv jedn?n? o uzav?en? smlouvy, a
to z jak?hokoliv d?vodu i bez uveden? d?vodu.
- a obsahuje-li nab?dku, je adres?t opr?vn?n nab?dku bezodkladn? p?ijmout;
Odes?latel tohoto e-mailu (nab?dky) vylu?uje p?ijet? nab?dky ze strany p??jemce
s dodatkem ?i odchylkou.
- trv? odes?latel na tom, ?e p??slu?n? smlouva je uzav?ena teprve v?slovn?m
dosa?en?m shody na v?ech jej?ch n?le?itostech.
- odes?latel tohoto emailu informuje, ?e nen? opr?vn?n uzav?rat za spole?nost
??dn? smlouvy s v?jimkou p??pad?, kdy k tomu byl p?semn? zmocn?n nebo p?semn?
pov??en a takov? pov??en? nebo pln? moc byly adres?tovi tohoto emailu p??padn?
osob?, kterou adres?t zastupuje, p?edlo?eny nebo jejich existence je adres?tovi
?i osob? j?m zastoupen? zn?m?.

This e-mail and any documents attached to it may be confidential and are
intended only for its intended recipients.
If you received this e-mail by mistake, please immediately inform its sender.
Delete the contents of this e-mail with all attachments and its copies from your
system.
If you are not the intended recipient of this e-mail, you are not authorized to
use, disseminate, copy or disclose this e-mail in any manner.
The sender of this e-mail shall not be liable for any possible damage caused by
modifications of the e-mail or by delay with transfer of the email.

In case that this e-mail forms part of business dealings:
- the sender reserves the right to end negotiations about entering into a
contract in any time, for any reason, and without stating any reasoning.
- if the e-mail contains an offer, the recipient is entitled to immediately
accept such offer; The sender of this e-mail (offer) excludes any acceptance of
the offer on the part of the recipient containing any amendment or variation.
- the sender insists on that the respective contract is concluded only upon an
express mutual agreement on all its aspects.
- the sender of this e-mail informs that he/she is not authorized to enter into
any contracts on behalf of the company except for cases in which he/she is
expressly authorized to do so in writing, and such authorization or power of
attorney is submitted to the recipient or the person represented by the
recipient, or the existence of such authorization is known to the recipient of
the person represented by the recipient.