Hi,
recently I received a strange error after running my code in chunks. But, I
don't get any errors when I run it line by line.
Also, what is strange is that the error message is misspelled
This is the error messages I get
*> setwd("H:/XX/XXX")*
*"rror: unexpected input in "setwd("H:/XX/XXX")*
*> *
*"rror: unexpected input in "*
*> GWS <- read.csv("X.csv", header = TRUE, sep = ",",
stringsAsFactors FALSE, na.strings=c("","","NA"))*
*"rror: unexpected input in "GWS <- read.csv("X.csv",
header = TRUE, sep ",", stringsAsFactors = FALSE,
na.strings=c("","","NA"))*
*> GWS <- GWS[with(GWS, order(d)), ]; row.names(GWS) <- NULL*
*Error: object 'GWS' not found*
As you can see even changing the directory results in an error message but,
it changes the directory to the correct folder.
What is interesting is that I was not getting this error yesterday (Dec.,
2nd 2015)
Could you please shed some light on this issue? Is it something related to
R or Rstudio or the packages?
Thank you in advance very much,
nick
[[alternative HTML version deleted]]
Hi You are probably not telling a whole story and what is worse, you are telling the story in HTML, which is hard to read. I get these sorts of errors> setwd("U:/data")Error in setwd("U:/data") : cannot change working directory>> setwd(D:/xxx/xxx)Error: unexpected '/' in "setwd(D:/"> setwd(D:\xxx\xxx)Error: unexpected input in "setwd(D:\">So you probably try enter directory name without quotes and with backslashes. Cheers Petr> -----Original Message----- > From: R-help [mailto:r-help-bounces at r-project.org] On Behalf Of Nicolae > Doban > Sent: Thursday, December 03, 2015 1:00 PM > To: r-help at r-project.org > Subject: [R] Strange error > > Hi, > > recently I received a strange error after running my code in chunks. > But, I > don't get any errors when I run it line by line. > > Also, what is strange is that the error message is misspelled > > This is the error messages I get > > *> setwd("H:/XX/XXX")* > *"rror: unexpected input in "setwd("H:/XX/XXX")* > *> * > *"rror: unexpected input in "* > *> GWS <- read.csv("X.csv", header = TRUE, sep = ",", stringsAsFactors > > FALSE, na.strings=c("","","NA"))* > *"rror: unexpected input in "GWS <- read.csv("X.csv", header = TRUE, > sep > ",", stringsAsFactors = FALSE, na.strings=c("","","NA"))* > *> GWS <- GWS[with(GWS, order(d)), ]; row.names(GWS) <- NULL* > *Error: object 'GWS' not found* > > As you can see even changing the directory results in an error message > but, > it changes the directory to the correct folder. > > What is interesting is that I was not getting this error yesterday > (Dec., > 2nd 2015) > > Could you please shed some light on this issue? Is it something related > to > R or Rstudio or the packages? > > Thank you in advance very much, > nick > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting- > guide.html > and provide commented, minimal, self-contained, reproducible code.________________________________ Tento e-mail a jak?koliv k n?mu p?ipojen? dokumenty jsou d?v?rn? a jsou ur?eny pouze jeho adres?t?m. Jestli?e jste obdr?el(a) tento e-mail omylem, informujte laskav? neprodlen? jeho odes?latele. Obsah tohoto emailu i s p??lohami a jeho kopie vyma?te ze sv?ho syst?mu. Nejste-li zam??len?m adres?tem tohoto emailu, nejste opr?vn?ni tento email jakkoliv u??vat, roz?i?ovat, kop?rovat ?i zve?ej?ovat. Odes?latel e-mailu neodpov?d? za eventu?ln? ?kodu zp?sobenou modifikacemi ?i zpo?d?n?m p?enosu e-mailu. 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You are posting in html format on a plain text mailing list, so we are not seeing what you sent. If you are being similarly careless with your data files then you may have corrupted the data. Do not use a word processor with R code or data files. -- Sent from my phone. Please excuse my brevity. On December 3, 2015 3:59:52 AM PST, Nicolae Doban <nickdoban at gmail.com> wrote:>Hi, > >recently I received a strange error after running my code in chunks. >But, I >don't get any errors when I run it line by line. > >Also, what is strange is that the error message is misspelled > >This is the error messages I get > >*> setwd("H:/XX/XXX")* >*"rror: unexpected input in "setwd("H:/XX/XXX")* >*> * >*"rror: unexpected input in "* >*> GWS <- read.csv("X.csv", header = TRUE, sep = ",", stringsAsFactors >>FALSE, na.strings=c("","","NA"))* >*"rror: unexpected input in "GWS <- read.csv("X.csv", header = TRUE, >sep >",", stringsAsFactors = FALSE, na.strings=c("","","NA"))* >*> GWS <- GWS[with(GWS, order(d)), ]; row.names(GWS) <- NULL* >*Error: object 'GWS' not found* > >As you can see even changing the directory results in an error message >but, >it changes the directory to the correct folder. > >What is interesting is that I was not getting this error yesterday >(Dec., >2nd 2015) > >Could you please shed some light on this issue? Is it something related >to >R or Rstudio or the packages? > >Thank you in advance very much, >nick > > [[alternative HTML version deleted]] > >______________________________________________ >R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see >https://stat.ethz.ch/mailman/listinfo/r-help >PLEASE do read the posting guide >http://www.R-project.org/posting-guide.html >and provide commented, minimal, self-contained, reproducible code.[[alternative HTML version deleted]]
Hi Nick, I think that Jeff may be correct in that the code was cut and pasted from a non-text application. In particular, the error message about "*" is suspicious. What may be happening is that when you select a single line, it only picks up the text, but when you select multiple lines, the garbage bytes come along for the ride. Since you seem to be using Windows, try Notepad (text editor) for an external editor as it is usually better behaved. The final error is the result of not having read the data into GWS. Jim On Thu, Dec 3, 2015 at 10:59 PM, Nicolae Doban <nickdoban at gmail.com> wrote:> Hi, > > recently I received a strange error after running my code in chunks. But, I > don't get any errors when I run it line by line. > > Also, what is strange is that the error message is misspelled > > This is the error messages I get > > *> setwd("H:/XX/XXX")* > *"rror: unexpected input in "setwd("H:/XX/XXX")* > *> * > *"rror: unexpected input in "* > *> GWS <- read.csv("X.csv", header = TRUE, sep = ",", stringsAsFactors > FALSE, na.strings=c("","","NA"))* > *"rror: unexpected input in "GWS <- read.csv("X.csv", header = TRUE, sep > ",", stringsAsFactors = FALSE, na.strings=c("","","NA"))* > *> GWS <- GWS[with(GWS, order(d)), ]; row.names(GWS) <- NULL* > *Error: object 'GWS' not found* > > As you can see even changing the directory results in an error message but, > it changes the directory to the correct folder. > > What is interesting is that I was not getting this error yesterday (Dec., > 2nd 2015) > > Could you please shed some light on this issue? Is it something related to > R or Rstudio or the packages? > > Thank you in advance very much, > nick > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. >[[alternative HTML version deleted]]
Hi again, i found the error: the problem was that I have created a template of rmarkdown myself inspired from Tufte one and I guess I didn't build it correctly..when i tried running it in a regular rmarkdown template it worked. sorry for inconvenience nick Nicolae (Nick) Doban | Masters student EIT KIC Energy for Smart Cities Master of Science Programme Tel.: +32 489 11 81 73 LinkedIn: https://be.linkedin.com/in/nicolaedoban Skype ID: doban.nicolae Twitter: https://twitter.com/NicolaeDoban GitHub: https://github.com/nickdoban On Fri, Dec 4, 2015 at 7:34 AM, Jim Lemon <drjimlemon at gmail.com> wrote:> Hi Nick, > I think that Jeff may be correct in that the code was cut and pasted from > a non-text application. In particular, the error message about "*" is > suspicious. What may be happening is that when you select a single line, it > only picks up the text, but when you select multiple lines, the garbage > bytes come along for the ride. Since you seem to be using Windows, try > Notepad (text editor) for an external editor as it is usually better > behaved. The final error is the result of not having read the data into GWS. > > Jim > > On Thu, Dec 3, 2015 at 10:59 PM, Nicolae Doban <nickdoban at gmail.com> > wrote: > >> Hi, >> >> recently I received a strange error after running my code in chunks. But, >> I >> don't get any errors when I run it line by line. >> >> Also, what is strange is that the error message is misspelled >> >> This is the error messages I get >> >> *> setwd("H:/XX/XXX")* >> *"rror: unexpected input in "setwd("H:/XX/XXX")* >> *> * >> *"rror: unexpected input in "* >> *> GWS <- read.csv("X.csv", header = TRUE, sep = ",", stringsAsFactors >> FALSE, na.strings=c("","","NA"))* >> *"rror: unexpected input in "GWS <- read.csv("X.csv", header = TRUE, sep >> ",", stringsAsFactors = FALSE, na.strings=c("","","NA"))* >> *> GWS <- GWS[with(GWS, order(d)), ]; row.names(GWS) <- NULL* >> *Error: object 'GWS' not found* >> >> As you can see even changing the directory results in an error message >> but, >> it changes the directory to the correct folder. >> >> What is interesting is that I was not getting this error yesterday (Dec., >> 2nd 2015) >> >> Could you please shed some light on this issue? Is it something related to >> R or Rstudio or the packages? >> >> Thank you in advance very much, >> nick >> >> [[alternative HTML version deleted]] >> >> ______________________________________________ >> R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see >> https://stat.ethz.ch/mailman/listinfo/r-help >> PLEASE do read the posting guide >> http://www.R-project.org/posting-guide.html >> and provide commented, minimal, self-contained, reproducible code. >> > >[[alternative HTML version deleted]]