Hi all I have problem in installation lme4 and have tried over the past 2 days. It failed to install from the various countries.> install.packages("lme4")Warning: unable to access index for repository http://cran.stat.nus.edu.sg/src/contrib Warning: unable to access index for repository http://www.stats.ox.ac.uk/pub/RWin/src/contrib Warning: unable to access index for repository http://cran.stat.nus.edu.sg/bin/windows/contrib/3.2 Warning message: package ?lme4? is not available (for R version 3.2.1) Teck Kiang On Thu, Aug 13, 2015 at 11:09 PM, Thierry Onkelinx <thierry.onkelinx at inbo.be> wrote:> Have you trying installing it directly from CRAN? > > install.packages("lme4") > > Do you have all dependencies installed? install.packages() from CRAN will > take care of that. You repos = NULL you have to install all dependencies > manually. > > ir. Thierry Onkelinx > Instituut voor natuur- en bosonderzoek / Research Institute for Nature and > Forest > team Biometrie & Kwaliteitszorg / team Biometrics & Quality Assurance > Kliniekstraat 25 > 1070 Anderlecht > Belgium > > To call in the statistician after the experiment is done may be no more > than asking him to perform a post-mortem examination: he may be able to say > what the experiment died of. ~ Sir Ronald Aylmer Fisher > The plural of anecdote is not data. ~ Roger Brinner > The combination of some data and an aching desire for an answer does not > ensure that a reasonable answer can be extracted from a given body of data. > ~ John Tukey > > 2015-08-13 16:13 GMT+02:00 <aurora.gonzalez at openmailbox.org>: > > > Hello > > > > I've downloaded the tar.gz file of the package "lme4" and when I use the > > coomand: > > > > install.packages("lme4_1.1-8.tar.gz", repos = NULL, type = "source") > > > > appears an error that suspends the installation: > > > > > > In file included from external.cpp:8:0: > > predModule.h:12:23: fatal error: RcppEigen.h: No such file or directory > > compilation terminated. > > make: *** [external.o] Error 1 > > ERROR: compilation failed for package ?lme4? > > * removing ?/home/aurora/R/x86_64-pc-linux-gnu-library/3.2/lme4? > > > > > > > > Does anyone know how to fix it? Thank you very much! > > > > > > My sessionInfo: > > > > > > R version 3.2.1 (2015-06-18) > > Platform: x86_64-pc-linux-gnu (64-bit) > > Running under: Ubuntu precise (12.04.5 LTS) > > > > locale: > > [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C > > [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 > > [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 > > [7] LC_PAPER=en_US.UTF-8 LC_NAME=C > > [9] LC_ADDRESS=C LC_TELEPHONE=C > > [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C > > > > attached base packages: > > [1] stats graphics grDevices utils datasets methods > > [7] base > > > > loaded via a namespace (and not attached): > > [1] tools_3.2.1 > > > > ______________________________________________ > > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see > > https://stat.ethz.ch/mailman/listinfo/r-help > > PLEASE do read the posting guide > > http://www.R-project.org/posting-guide.html > > and provide commented, minimal, self-contained, reproducible code. > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. >[[alternative HTML version deleted]]
On 13.08.2015 22:52, Teck Kiang Tan wrote:> Hi all > > I have problem in installation lme4 and have tried over the past 2 days. It > failed to install from the various countries. > >> install.packages("lme4") > Warning: unable to access index for repository > http://cran.stat.nus.edu.sg/src/contribThis mirror does not respond whn I just tried, choose another one.> Warning: unable to access index for repository > http://www.stats.ox.ac.uk/pub/RWin/src/contribThis one works for me (but does not contain lme4). Perhaps also run setInternet2() before you try again in cae you need proxy settings. Best, Uwe Ligges> Warning: unable to access index for repository > http://cran.stat.nus.edu.sg/bin/windows/contrib/3.2 > > Warning message: > package ?lme4? is not available (for R version 3.2.1) > > Teck Kiang > > > On Thu, Aug 13, 2015 at 11:09 PM, Thierry Onkelinx <thierry.onkelinx at inbo.be >> wrote: > >> Have you trying installing it directly from CRAN? >> >> install.packages("lme4") >> >> Do you have all dependencies installed? install.packages() from CRAN will >> take care of that. You repos = NULL you have to install all dependencies >> manually. >> >> ir. Thierry Onkelinx >> Instituut voor natuur- en bosonderzoek / Research Institute for Nature and >> Forest >> team Biometrie & Kwaliteitszorg / team Biometrics & Quality Assurance >> Kliniekstraat 25 >> 1070 Anderlecht >> Belgium >> >> To call in the statistician after the experiment is done may be no more >> than asking him to perform a post-mortem examination: he may be able to say >> what the experiment died of. ~ Sir Ronald Aylmer Fisher >> The plural of anecdote is not data. ~ Roger Brinner >> The combination of some data and an aching desire for an answer does not >> ensure that a reasonable answer can be extracted from a given body of data. >> ~ John Tukey >> >> 2015-08-13 16:13 GMT+02:00 <aurora.gonzalez at openmailbox.org>: >> >>> Hello >>> >>> I've downloaded the tar.gz file of the package "lme4" and when I use the >>> coomand: >>> >>> install.packages("lme4_1.1-8.tar.gz", repos = NULL, type = "source") >>> >>> appears an error that suspends the installation: >>> >>> >>> In file included from external.cpp:8:0: >>> predModule.h:12:23: fatal error: RcppEigen.h: No such file or directory >>> compilation terminated. >>> make: *** [external.o] Error 1 >>> ERROR: compilation failed for package ?lme4? >>> * removing ?/home/aurora/R/x86_64-pc-linux-gnu-library/3.2/lme4? >>> >>> >>> >>> Does anyone know how to fix it? Thank you very much! >>> >>> >>> My sessionInfo: >>> >>> >>> R version 3.2.1 (2015-06-18) >>> Platform: x86_64-pc-linux-gnu (64-bit) >>> Running under: Ubuntu precise (12.04.5 LTS) >>> >>> locale: >>> [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C >>> [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 >>> [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 >>> [7] LC_PAPER=en_US.UTF-8 LC_NAME=C >>> [9] LC_ADDRESS=C LC_TELEPHONE=C >>> [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C >>> >>> attached base packages: >>> [1] stats graphics grDevices utils datasets methods >>> [7] base >>> >>> loaded via a namespace (and not attached): >>> [1] tools_3.2.1 >>> >>> ______________________________________________ >>> R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see >>> https://stat.ethz.ch/mailman/listinfo/r-help >>> PLEASE do read the posting guide >>> http://www.R-project.org/posting-guide.html >>> and provide commented, minimal, self-contained, reproducible code. >> >> [[alternative HTML version deleted]] >> >> ______________________________________________ >> R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see >> https://stat.ethz.ch/mailman/listinfo/r-help >> PLEASE do read the posting guide >> http://www.R-project.org/posting-guide.html >> and provide commented, minimal, self-contained, reproducible code. >> > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. >
Thanks Uwe Ligges for the suggestion. I tried using setInternet2() but also failed. I tried for several other countries but also failed. Any other suggestion to overcome it. Thanks. Warning: unable to access index for repository http://cran.utstat.utoronto.ca/src/contrib Warning: unable to access index for repository http://www.stats.ox.ac.uk/pub/RWin/src/contrib Warning: unable to access index for repository http://cran.utstat.utoronto.ca/bin/windows/contrib/3.2 Warning: unable to access index for repository http://www.stats.ox.ac.uk/pub/RWin/bin/windows/contrib/3.2 On Fri, Aug 14, 2015 at 1:29 PM, Uwe Ligges <ligges at statistik.tu-dortmund.de> wrote:> > > On 13.08.2015 22:52, Teck Kiang Tan wrote: > >> Hi all >> >> I have problem in installation lme4 and have tried over the past 2 days. >> It >> failed to install from the various countries. >> >> install.packages("lme4") >>> >> Warning: unable to access index for repository >> http://cran.stat.nus.edu.sg/src/contrib >> > > > This mirror does not respond whn I just tried, choose another one. > > > Warning: unable to access index for repository >> http://www.stats.ox.ac.uk/pub/RWin/src/contrib >> > > This one works for me (but does not contain lme4). > Perhaps also run setInternet2() before you try again in cae you need proxy > settings. > > Best, > Uwe Ligges > > > > > Warning: unable to access index for repository >> http://cran.stat.nus.edu.sg/bin/windows/contrib/3.2 >> >> Warning message: >> package ?lme4? is not available (for R version 3.2.1) >> >> Teck Kiang >> >> >> On Thu, Aug 13, 2015 at 11:09 PM, Thierry Onkelinx < >> thierry.onkelinx at inbo.be >> >>> wrote: >>> >> >> Have you trying installing it directly from CRAN? >>> >>> install.packages("lme4") >>> >>> Do you have all dependencies installed? install.packages() from CRAN will >>> take care of that. You repos = NULL you have to install all dependencies >>> manually. >>> >>> ir. Thierry Onkelinx >>> Instituut voor natuur- en bosonderzoek / Research Institute for Nature >>> and >>> Forest >>> team Biometrie & Kwaliteitszorg / team Biometrics & Quality Assurance >>> Kliniekstraat 25 >>> 1070 Anderlecht >>> Belgium >>> >>> To call in the statistician after the experiment is done may be no more >>> than asking him to perform a post-mortem examination: he may be able to >>> say >>> what the experiment died of. ~ Sir Ronald Aylmer Fisher >>> The plural of anecdote is not data. ~ Roger Brinner >>> The combination of some data and an aching desire for an answer does not >>> ensure that a reasonable answer can be extracted from a given body of >>> data. >>> ~ John Tukey >>> >>> 2015-08-13 16:13 GMT+02:00 <aurora.gonzalez at openmailbox.org>: >>> >>> Hello >>>> >>>> I've downloaded the tar.gz file of the package "lme4" and when I use the >>>> coomand: >>>> >>>> install.packages("lme4_1.1-8.tar.gz", repos = NULL, type = "source") >>>> >>>> appears an error that suspends the installation: >>>> >>>> >>>> In file included from external.cpp:8:0: >>>> predModule.h:12:23: fatal error: RcppEigen.h: No such file or directory >>>> compilation terminated. >>>> make: *** [external.o] Error 1 >>>> ERROR: compilation failed for package ?lme4? >>>> * removing ?/home/aurora/R/x86_64-pc-linux-gnu-library/3.2/lme4? >>>> >>>> >>>> >>>> Does anyone know how to fix it? Thank you very much! >>>> >>>> >>>> My sessionInfo: >>>> >>>> >>>> R version 3.2.1 (2015-06-18) >>>> Platform: x86_64-pc-linux-gnu (64-bit) >>>> Running under: Ubuntu precise (12.04.5 LTS) >>>> >>>> locale: >>>> [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C >>>> [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 >>>> [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 >>>> [7] LC_PAPER=en_US.UTF-8 LC_NAME=C >>>> [9] LC_ADDRESS=C LC_TELEPHONE=C >>>> [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C >>>> >>>> attached base packages: >>>> [1] stats graphics grDevices utils datasets methods >>>> [7] base >>>> >>>> loaded via a namespace (and not attached): >>>> [1] tools_3.2.1 >>>> >>>> ______________________________________________ >>>> R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see >>>> https://stat.ethz.ch/mailman/listinfo/r-help >>>> PLEASE do read the posting guide >>>> http://www.R-project.org/posting-guide.html >>>> and provide commented, minimal, self-contained, reproducible code. >>>> >>> >>> [[alternative HTML version deleted]] >>> >>> ______________________________________________ >>> R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see >>> https://stat.ethz.ch/mailman/listinfo/r-help >>> PLEASE do read the posting guide >>> http://www.R-project.org/posting-guide.html >>> and provide commented, minimal, self-contained, reproducible code. >>> >>> >> [[alternative HTML version deleted]] >> >> ______________________________________________ >> R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see >> https://stat.ethz.ch/mailman/listinfo/r-help >> PLEASE do read the posting guide >> http://www.R-project.org/posting-guide.html >> and provide commented, minimal, self-contained, reproducible code. >> >>[[alternative HTML version deleted]]