Hi,
I'm trying to extract sequences from my data, using the SPADE algorithm in
the arulesSequences package:
1 1 8 1100 31 45 31 45 1 5 1200
1 2 100 1100 31 45 1 5 31
1 3 59 1100 31 45 1 81 1000 1 1 5
1 4 69 1100 31 45 17 1000 610 1000 1 1 81
1 5 31 1100 31 45 81 1000
(library(Matrix
(library(arules
(library(arulesSequences
((x<-read_baskets(file.choose(), info =
c("sequenceID","eventID","size
("as(x,"data.frame
((s1 <- cspade(x, parameter = list(support = 0.4), control = list(verbose
TRUE
R-studio starts to run the commands and than seems to stall:
:parameter specification
support : 0.4
maxsize : 10
maxlen : 10
:algorithmic control
bfstype : FALSE
verbose : TRUE
summary : FALSE
tidLists : FALSE
[preprocessing ... 1 partition(s), 0 MB [0.1s
mining transactions ...
This also happened when I tried ti run the commands on only 10 observations.
Any suggestions as to what is wrong?
Simon
[[alternative HTML version deleted]]
Please don't post in HTML - your code is unreadable. Using dput() to provide some of your data may also encourage people to help you figure out what's wrong. Without a reproducible example that includes some sample data (fake is fine), the code you used, and some clear idea of what output you expect, it's impossible to figure out how to help you. Here are some suggestions for creating a good reproducible example: http://stackoverflow.com/questions/5963269/how-to-make-a-great-r-reproducible-example On Wed, Mar 11, 2015 at 10:36 AM, Simon Givoli <givolis at gmail.com> wrote:> Hi, > > I'm trying to extract sequences from my data, using the SPADE algorithm in > the arulesSequences package: > > 1 1 8 1100 31 45 31 45 1 5 1200 > 1 2 100 1100 31 45 1 5 31 > 1 3 59 1100 31 45 1 81 1000 1 1 5 > 1 4 69 1100 31 45 17 1000 610 1000 1 1 81 > 1 5 31 1100 31 45 81 1000 > > (library(Matrix > (library(arules > (library(arulesSequences > > ((x<-read_baskets(file.choose(), info = c("sequenceID","eventID","size > ("as(x,"data.frame > > ((s1 <- cspade(x, parameter = list(support = 0.4), control = list(verbose > TRUE > > R-studio starts to run the commands and than seems to stall: > > > > :parameter specification > support : 0.4 > maxsize : 10 > maxlen : 10 > > :algorithmic control > bfstype : FALSE > verbose : TRUE > summary : FALSE > tidLists : FALSE > > [preprocessing ... 1 partition(s), 0 MB [0.1s > mining transactions ... > > This also happened when I tried ti run the commands on only 10 observations. > > Any suggestions as to what is wrong? > > Simon > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code.-- Sarah Goslee http://www.functionaldiversity.org
Also, of the problem only occurs in RStudio then your question would need to be
asked in their support forum. They do override some standard R functions so
occasionally there are bugs introduced by that. Check if it occurs in plain R
before posting here.
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On March 11, 2015 8:09:29 AM PDT, Sarah Goslee <sarah.goslee at gmail.com>
wrote:>Please don't post in HTML - your code is unreadable.
>
>Using dput() to provide some of your data may also encourage people to
>help you figure out what's wrong.
>
>Without a reproducible example that includes some sample data (fake is
>fine), the code you used, and some clear idea of what output you
>expect, it's impossible to figure out how to help you. Here are some
>suggestions for creating a good reproducible example:
>http://stackoverflow.com/questions/5963269/how-to-make-a-great-r-reproducible-example
>
>
>On Wed, Mar 11, 2015 at 10:36 AM, Simon Givoli <givolis at gmail.com>
>wrote:
>> Hi,
>>
>> I'm trying to extract sequences from my data, using the SPADE
>algorithm in
>> the arulesSequences package:
>>
>> 1 1 8 1100 31 45 31 45 1 5 1200
>> 1 2 100 1100 31 45 1 5 31
>> 1 3 59 1100 31 45 1 81 1000 1 1 5
>> 1 4 69 1100 31 45 17 1000 610 1000 1 1 81
>> 1 5 31 1100 31 45 81 1000
>>
>> (library(Matrix
>> (library(arules
>> (library(arulesSequences
>>
>> ((x<-read_baskets(file.choose(), info
>c("sequenceID","eventID","size
>> ("as(x,"data.frame
>>
>> ((s1 <- cspade(x, parameter = list(support = 0.4), control
>list(verbose >> TRUE
>>
>> R-studio starts to run the commands and than seems to stall:
>>
>>
>>
>> :parameter specification
>> support : 0.4
>> maxsize : 10
>> maxlen : 10
>>
>> :algorithmic control
>> bfstype : FALSE
>> verbose : TRUE
>> summary : FALSE
>> tidLists : FALSE
>>
>> [preprocessing ... 1 partition(s), 0 MB [0.1s
>> mining transactions ...
>>
>> This also happened when I tried ti run the commands on only 10
>observations.
>>
>> Any suggestions as to what is wrong?
>>
>> Simon
>>
>> [[alternative HTML version deleted]]
>>
>> ______________________________________________
>> R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see
>> https://stat.ethz.ch/mailman/listinfo/r-help
>> PLEASE do read the posting guide
>http://www.R-project.org/posting-guide.html
>> and provide commented, minimal, self-contained, reproducible code.