Juan Telleria Ruiz de Aguirre
2019-May-29 19:47 UTC
[Rd] Converting non-32-bit integers from python to R to use bit64: reticulate
Dear R Developers, There is an interesting issue related to "reticulate" R package which discusses how to convert Python's non-32 bit integers to R, which has had quite an exhaustive discussion: https://github.com/rstudio/reticulate/issues/323 Python seems to handle integers differently from R, and is dependant on the system arquitecture: On 32 bit systems uses 32-bit integers, and on 64-bit systems uses 64-bit integers. So my question is: As regards R's C Interface, how costly would it be to convert INTSXP from 32 bits to 64 bits using C, on 64 bits Systems? Do the benefits surpass the costs? And should such development be handled from within R Core / Ordinary Members , or it shall be left to package maintainers? Thank you! :) [[alternative HTML version deleted]]
Gabriel Becker
2019-May-29 20:24 UTC
[Rd] Converting non-32-bit integers from python to R to use bit64: reticulate
Hi Juan, Comments inline. On Wed, May 29, 2019 at 12:48 PM Juan Telleria Ruiz de Aguirre < jtelleria.rproject at gmail.com> wrote:> Dear R Developers, > > There is an interesting issue related to "reticulate" R package which > discusses how to convert Python's non-32 bit integers to R, which has had > quite an exhaustive discussion: > > https://github.com/rstudio/reticulate/issues/323 > > Python seems to handle integers differently from R, and is dependant on the > system arquitecture: On 32 bit systems uses 32-bit integers, and on 64-bit > systems uses 64-bit integers. > > So my question is: > > As regards R's C Interface, how costly would it be to convert INTSXP from > 32 bits to 64 bits using C, on 64 bits Systems? Do the benefits surpass the > costs? And should such development be handled from within R Core / Ordinary > Members , or it shall be left to package maintainers? >Well, I am not an R-core member, but I can mention a few things: 1. This seems like it would make the results of R code non-reproducible between 32 and 64bit versions of R; at least some code would give different results (at the very least in terms of when integer values overflow to NA, which is documented behavior). 2. Obviously all integer data would take twice as much memory, memory bandwidth, space in caches, etc, even when it doesn't need it. 3. Various places treat data /data pointers coming out of INTSXP and LGLSXP objects the same within the internal R sources (as currently they're both int/int*). Catching and fixing all those wouldn't be impossible, but it would take at least some doing. For me personally 1 seems like a big problem, and 3 makes the conversion more work than it might have seemed initially. As a related side note, as far as I understand what I've heard from R-core members directly, the choice to not have multiple types of integers is intentional and unlikely to change. Best, ~G> > Thank you! :) > > [[alternative HTML version deleted]] > > ______________________________________________ > R-devel at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel >[[alternative HTML version deleted]]
Juan Telleria Ruiz de Aguirre
2019-May-30 16:46 UTC
[Rd] Converting non-32-bit integers from python to R to use bit64: reticulate
Thank you Gabriel for valuable insights on the 64-bit integers topic. In addition, my statement was wrong, as Python3 seems to have unlimited (and variable) size integers. Here is related CPython Code: https://github.com/python/cpython/blob/master/Objects/longobject.c Division between Int-32 and Int-64 seems to only happen in Python2. Best, Juan El mi?rcoles, 29 de mayo de 2019, Gabriel Becker <gabembecker at gmail.com> escribi?:> Hi Juan, > > Comments inline. > > On Wed, May 29, 2019 at 12:48 PM Juan Telleria Ruiz de Aguirre < > jtelleria.rproject at gmail.com> wrote: > >> Dear R Developers, >> >> There is an interesting issue related to "reticulate" R package which >> discusses how to convert Python's non-32 bit integers to R, which has had >> quite an exhaustive discussion: >> >> https://github.com/rstudio/reticulate/issues/323 >> >> Python seems to handle integers differently from R, and is dependant on >> the >> system arquitecture: On 32 bit systems uses 32-bit integers, and on 64-bit >> systems uses 64-bit integers. >> >> So my question is: >> >> As regards R's C Interface, how costly would it be to convert INTSXP from >> 32 bits to 64 bits using C, on 64 bits Systems? Do the benefits surpass >> the >> costs? And should such development be handled from within R Core / >> Ordinary >> Members , or it shall be left to package maintainers? >> > > Well, I am not an R-core member, but I can mention a few things: > > 1. This seems like it would make the results of R code non-reproducible > between 32 and 64bit versions of R; at least some code would give different > results (at the very least in terms of when integer values overflow to NA, > which is documented behavior). > 2. Obviously all integer data would take twice as much memory, memory > bandwidth, space in caches, etc, even when it doesn't need it. > 3. Various places treat data /data pointers coming out of INTSXP and > LGLSXP objects the same within the internal R sources (as currently they're > both int/int*). Catching and fixing all those wouldn't be impossible, but > it would take at least some doing. > > For me personally 1 seems like a big problem, and 3 makes the conversion > more work than it might have seemed initially. > > As a related side note, as far as I understand what I've heard from R-core > members directly, the choice to not have multiple types of integers is > intentional and unlikely to change. > > Best, > ~G > > > > >> >> Thank you! :) >> >> [[alternative HTML version deleted]] >> >> ______________________________________________ >> R-devel at r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/r-devel >> >[[alternative HTML version deleted]]
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