Paul Geeleher
2014-Mar-21 19:04 UTC
[Rd] "ERROR: installing package indices failed" message when building my package?
Hey all,
I'm currently trying to build an R package and don't really know what
to make of the error message I'm getting. I couldn't find anything
helpful online so hopefully somebody here can give me a couple of
pointers. I see the following when I try to build:
s$ R CMD build --verbose r_package_files/
Warning: unknown option '--verbose'
* checking for file 'r_package_files/DESCRIPTION' ... OK
* preparing 'pRRophetic':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
-----------------------------------
* installing *source* package 'pRRophetic' ...
** R
** data
** inst
** preparing package for lazy loading
Warning: replacing previous import by 'genefilter::Anova' when loading
'pRRophetic'
** help
No man pages found in package 'pRRophetic'
*** installing help indices
** building package indices
Error in scan(file, what, nmax, sep, dec, quote, skip, nlines, na.strings, :
line 1 did not have 38 elements
ERROR: installing package indices failed
Thanks in advance for any help!
Paul.
--
Dr. Paul Geeleher, PhD
Section of Hematology-Oncology
Department of Medicine
The University of Chicago
900 E. 57th St.,
KCBD, Room 7144
Chicago, IL 60637
--
www.bioinformaticstutorials.com
Martin Maechler
2014-Mar-24 10:53 UTC
[Rd] "ERROR: installing package indices failed" message when building my package?
>>>>> Paul Geeleher <paulgeeleher at gmail.com> >>>>> on Fri, 21 Mar 2014 14:04:29 -0500 writes:> Hey all, I'm currently trying to build an R package and > don't really know what to make of the error message I'm > getting. I couldn't find anything helpful online so > hopefully somebody here can give me a couple of > pointers. I see the following when I try to build: > s$ R CMD build --verbose r_package_files/ > Warning: unknown option '--verbose' > * checking for file 'r_package_files/DESCRIPTION' ... OK > * preparing 'pRRophetic': > * checking DESCRIPTION meta-information ... OK > * installing the package to build vignettes > ----------------------------------- > * installing *source* package 'pRRophetic' ... > ** R > ** data > ** inst > ** preparing package for lazy loading > Warning: replacing previous import by 'genefilter::Anova' when loading > 'pRRophetic' > ** help > No man pages found in package 'pRRophetic' Well, this could be it. It may well be that we (R authors) do require some man pages, and I would not disagree with such a requirement. Do provide at least a man/pRRophetic-package.Rd file if nothing else. You can use promptPackage() to create a prototype for such a file easily. Martin > *** installing help indices > ** building package indices > Error in scan(file, what, nmax, sep, dec, quote, skip, nlines, na.strings, : > line 1 did not have 38 elements > ERROR: installing package indices failed > Thanks in advance for any help! > Paul. > -- > Dr. Paul Geeleher, PhD > Section of Hematology-Oncology > Department of Medicine > The University of Chicago > 900 E. 57th St., > KCBD, Room 7144 > Chicago, IL 60637 > -- > www.bioinformaticstutorials.com > ______________________________________________ > R-devel at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel