Paul Geeleher
2014-Mar-21 19:04 UTC
[Rd] "ERROR: installing package indices failed" message when building my package?
Hey all, I'm currently trying to build an R package and don't really know what to make of the error message I'm getting. I couldn't find anything helpful online so hopefully somebody here can give me a couple of pointers. I see the following when I try to build: s$ R CMD build --verbose r_package_files/ Warning: unknown option '--verbose' * checking for file 'r_package_files/DESCRIPTION' ... OK * preparing 'pRRophetic': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes ----------------------------------- * installing *source* package 'pRRophetic' ... ** R ** data ** inst ** preparing package for lazy loading Warning: replacing previous import by 'genefilter::Anova' when loading 'pRRophetic' ** help No man pages found in package 'pRRophetic' *** installing help indices ** building package indices Error in scan(file, what, nmax, sep, dec, quote, skip, nlines, na.strings, : line 1 did not have 38 elements ERROR: installing package indices failed Thanks in advance for any help! Paul. -- Dr. Paul Geeleher, PhD Section of Hematology-Oncology Department of Medicine The University of Chicago 900 E. 57th St., KCBD, Room 7144 Chicago, IL 60637 -- www.bioinformaticstutorials.com
Martin Maechler
2014-Mar-24 10:53 UTC
[Rd] "ERROR: installing package indices failed" message when building my package?
>>>>> Paul Geeleher <paulgeeleher at gmail.com> >>>>> on Fri, 21 Mar 2014 14:04:29 -0500 writes:> Hey all, I'm currently trying to build an R package and > don't really know what to make of the error message I'm > getting. I couldn't find anything helpful online so > hopefully somebody here can give me a couple of > pointers. I see the following when I try to build: > s$ R CMD build --verbose r_package_files/ > Warning: unknown option '--verbose' > * checking for file 'r_package_files/DESCRIPTION' ... OK > * preparing 'pRRophetic': > * checking DESCRIPTION meta-information ... OK > * installing the package to build vignettes > ----------------------------------- > * installing *source* package 'pRRophetic' ... > ** R > ** data > ** inst > ** preparing package for lazy loading > Warning: replacing previous import by 'genefilter::Anova' when loading > 'pRRophetic' > ** help > No man pages found in package 'pRRophetic' Well, this could be it. It may well be that we (R authors) do require some man pages, and I would not disagree with such a requirement. Do provide at least a man/pRRophetic-package.Rd file if nothing else. You can use promptPackage() to create a prototype for such a file easily. Martin > *** installing help indices > ** building package indices > Error in scan(file, what, nmax, sep, dec, quote, skip, nlines, na.strings, : > line 1 did not have 38 elements > ERROR: installing package indices failed > Thanks in advance for any help! > Paul. > -- > Dr. Paul Geeleher, PhD > Section of Hematology-Oncology > Department of Medicine > The University of Chicago > 900 E. 57th St., > KCBD, Room 7144 > Chicago, IL 60637 > -- > www.bioinformaticstutorials.com > ______________________________________________ > R-devel at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel