Christophe Dutang
2009-May-10 09:52 UTC
[Rd] Vignettes with missing or empty \VignetteIndexEntry:
Hi,
I have a problem when checking the package 'probdistr' (on probability
distributions).
I got this warning
* checking index information ... WARNING
Vignettes with missing or empty \VignetteIndexEntry:
[1] "probdistr-chi" "probdistr-contextra"
"probdistr-discrete"
[4] "probdistr-discrextra" "probdistr-exp"
"probdistr-
finitesupp"
[7] "probdistr-gaussian" "probdistr-general"
"probdistr-gumbel"
[10] "probdistr-intro" "probdistr-logis"
"probdistr-math"
[13] "probdistr-misc" "probdistr-mult"
"probdistr-pareto"
[16] "probdistr-student"
See the information on INDEX files and package subdirectories in the
chapter 'Creating R packages' of the 'Writing R Extensions'
manual.
The warning tells me \VignetteIndexEntry is missing however there is
one in probdistr-main.Rnw (Sweave file calling all other files via
\SweaveInput{probdistr-XXXXX}). Let us note this file is not listed in
the above files...
But the build is ok
* checking for file 'pkg/DESCRIPTION' ... OK
* preparing 'pkg':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package ?probdistr? ...
** R
** inst
** help
*** installing help indices
>>> Building/Updating help pages for package 'probdistr'
Formats: text html latex example
codeforplot text html latex example
** building package indices ...
* DONE (probdistr)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'probdistr_1.00.tar.gz'
Does someone have an idea about this?
Thanks in advance
Christophe
PS : files are available on R-forge
--
Christophe Dutang
Ph. D. student at ISFA, Lyon, France
website: http://dutangc.free.fr
Christophe Dutang
2009-May-10 10:08 UTC
[Rd] Fwd: Vignettes with missing or empty \VignetteIndexEntry:
I also have another warning while checking the package * checking package vignettes in 'inst/doc' ... WARNING Package vignettes without corresponding PDF: .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr- chi.Rnw .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr- contextra.Rnw .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr- discrete.Rnw .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr- discrextra.Rnw .../These/code/R/probdistr/Rforge/distributions/pkg/inst/doc/ probdistr-exp.Rnw .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr- finitesupp.Rnw .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr- gaussian.Rnw .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr- general.Rnw .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr- gumbel.Rnw .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr- intro.Rnw .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr- logis.Rnw .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr- math.Rnw .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr- misc.Rnw .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr- mult.Rnw .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr- pareto.Rnw .../code/R/probdistr/Rforge/distributions/pkg/inst/doc/probdistr- student.Rnw * checking PDF version of manual ... OK Début du message réexpédié :> De : Christophe Dutang <dutangc@gmail.com> > Date : 10 mai 2009 11:52:17 HAEC > À : r-devel@r-project.org > Objet : Vignettes with missing or empty \VignetteIndexEntry: > > Hi, > > I have a problem when checking the package 'probdistr' (on > probability distributions). > I got this warning > > * checking index information ... WARNING > Vignettes with missing or empty \VignetteIndexEntry: > [1] "probdistr-chi" "probdistr-contextra" "probdistr-discrete" > [4] "probdistr-discrextra" "probdistr-exp" "probdistr- > finitesupp" > [7] "probdistr-gaussian" "probdistr-general" "probdistr-gumbel" > [10] "probdistr-intro" "probdistr-logis" "probdistr-math" > [13] "probdistr-misc" "probdistr-mult" "probdistr-pareto" > [16] "probdistr-student" > See the information on INDEX files and package subdirectories in the > chapter 'Creating R packages' of the 'Writing R Extensions' manual. > > The warning tells me \VignetteIndexEntry is missing however there is > one in probdistr-main.Rnw (Sweave file calling all other files via > \SweaveInput{probdistr-XXXXX}). Let us note this file is not listed > in the above files... > > But the build is ok > > * checking for file 'pkg/DESCRIPTION' ... OK > * preparing 'pkg': > * checking DESCRIPTION meta-information ... OK > * installing the package to re-build vignettes > * Installing *source* package ‘probdistr’ ... > ** R > ** inst > ** help > *** installing help indices > >>> Building/Updating help pages for package 'probdistr' > Formats: text html latex example > codeforplot text html latex example > ** building package indices ... > * DONE (probdistr) > * creating vignettes ... OK > * removing junk files > * checking for LF line-endings in source and make files > * checking for empty or unneeded directories > * building 'probdistr_1.00.tar.gz' > > Does someone have an idea about this? > > Thanks in advance > > Christophe > > PS : files are available on R-forge > > -- > Christophe Dutang > Ph. D. student at ISFA, Lyon, France > website: http://dutangc.free.fr > > > >-- Christophe Dutang Ph. D. student at ISFA, Lyon, France website: http://dutangc.free.fr [[alternative HTML version deleted]]
Kurt Hornik
2009-May-11 13:10 UTC
[Rd] Vignettes with missing or empty \VignetteIndexEntry:
>>>>> Christophe Dutang writes:> Hi, > I have a problem when checking the package 'probdistr' (on probability > distributions). > I got this warning> * checking index information ... WARNING > Vignettes with missing or empty \VignetteIndexEntry: > [1] "probdistr-chi" "probdistr-contextra" "probdistr-discrete" > [4] "probdistr-discrextra" "probdistr-exp" "probdistr- > finitesupp" > [7] "probdistr-gaussian" "probdistr-general" "probdistr-gumbel" > [10] "probdistr-intro" "probdistr-logis" "probdistr-math" > [13] "probdistr-misc" "probdistr-mult" "probdistr-pareto" > [16] "probdistr-student" > See the information on INDEX files and package subdirectories in the > chapter 'Creating R packages' of the 'Writing R Extensions' manual.> The warning tells me \VignetteIndexEntry is missing however there is > one in probdistr-main.Rnw (Sweave file calling all other files via > \SweaveInput{probdistr-XXXXX}). Let us note this file is not listed in > the above files...> But the build is ok> * checking for file 'pkg/DESCRIPTION' ... OK > * preparing 'pkg': > * checking DESCRIPTION meta-information ... OK > * installing the package to re-build vignettes > * Installing *source* package ?probdistr? ... > ** R > ** inst > ** help > *** installing help indices >>>> Building/Updating help pages for package 'probdistr' > Formats: text html latex example > codeforplot text html latex example > ** building package indices ... > * DONE (probdistr) > * creating vignettes ... OK > * removing junk files > * checking for LF line-endings in source and make files > * checking for empty or unneeded directories > * building 'probdistr_1.00.tar.gz'> Does someone have an idea about this?Sure. The QC tools have no idea about \SweaveInput, and think that each .Rnw should have a \VignetteIndexEntry. -k> Thanks in advance> Christophe> PS : files are available on R-forge> -- > Christophe Dutang > Ph. D. student at ISFA, Lyon, France > website: http://dutangc.free.fr> ______________________________________________ > R-devel at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel