Hi all, I'm Pierre Lindenbaum and I'm new to 'R'. I'm currently working with a colleague who has created a java bioinformatic tool using 'R' . No problem : we work on linux, we call 'R' using a system call via java.lang.Runtime.exec, we know the $path to 'R', etc... But now, we would like to distribute our java application as a *.jar archive and I wondered what is the best way to install it on window: is there a way to embed 'R' in my java archive ? can I install 'R' on windows from my java archive ? what is the best way to call 'R' from java. Can I avoid this system call ?...etc... Any help will be appreciated :-) Thanks in advance. Pierre