charpent@bacbuc.dyndns.org
2002-Dec-17 10:40 UTC
[Rd] rsprng doesn't install on Debian (woody) (PR#2378)
Full_Name: Emmanuel Charpentier Version: 1.6.1 OS: Linux 2.4.20 / Debian Woody Submission from: (NULL) (80.15.78.96) rsprng depends on libraries available in the "genesis" package. However, even when Genesis is installed, the installation of the source package fails for not finding rsprng.h. It turns out that Debian installs it in a subdirectoru of /usr/include, and that the rsprng packages assumes that it is located in /usr/include. I have but a suggestion : allow the rsprng installation to look in /usr/include subdirectories. Sincerely, Emmanuel Charpentier
A.J. Rossini
2002-Dec-17 13:54 UTC
[Rd] rsprng doesn't install on Debian (woody) (PR#2378)
>>>>> "charpent" == charpent <charpent@bacbuc.dyndns.org> writes:charpent> Full_Name: Emmanuel Charpentier charpent> Version: 1.6.1 charpent> OS: Linux 2.4.20 / Debian Woody charpent> Submission from: (NULL) (80.15.78.96) charpent> rsprng depends on libraries available in the "genesis" package. However, even charpent> when Genesis is installed, the installation of the source package fails for not charpent> finding rsprng.h. It turns out that Debian installs it in a subdirectoru of charpent> /usr/include, and that the rsprng packages assumes that it is located in charpent> /usr/include. charpent> I have but a suggestion : allow the rsprng installation to look in /usr/include charpent> subdirectories. Executive Summary: The Debian genesis package contains SPRNG v1.0. The R RSPRNG package is really set up to use SPRNG v2.0. There are extremely crude RPM/DEB packages of v2.0 for Intel Linux at http://software.biostat.washington.edu/~rossini/cluster_computing/ (I should stress again, they are fairly crude; but they work on our machines, and apparently, on some other people's machines as well). best, -tony -- A.J. Rossini Rsrch. Asst. Prof. of Biostatistics U. of Washington Biostatistics rossini@u.washington.edu FHCRC/SCHARP/HIV Vaccine Trials Net rossini@scharp.org -------------- http://software.biostat.washington.edu/ ---------------- FHCRC: M: 206-667-7025 (fax=4812)|Voicemail is pretty sketchy/use Email UW: Th: 206-543-1044 (fax=3286)|Change last 4 digits of phone to FAX (my tuesday/wednesday/friday locations are completely unpredictable.)