The build system rolled up R-3.3.2.tar.gz (codename "Sincere Pumpkin Patch") this morning. The list below details the changes in this release. You can get the source code from http://cran.r-project.org/src/base/R-3/R-3.3.2.tar.gz or wait for it to be mirrored at a CRAN site nearer to you. Binaries for various platforms will appear in due course. For the R Core Team, Peter Dalgaard These are the md5sums for the freshly created files, in case you wish to check that they are uncorrupted: MD5 (AUTHORS) = eb97a5cd38acb1cfc6408988bffef765 MD5 (COPYING) = eb723b61539feef013de476e68b5c50a MD5 (COPYING.LIB) = a6f89e2100d9b6cdffcea4f398e37343 MD5 (FAQ) = 342856fe28ac8af7c8d48db1f6dde8e2 MD5 (INSTALL) = 7893f754308ca31f1ccf62055090ad7b MD5 (NEWS) = 3edf7e6a206a1303ed50979fb21d2ab7 MD5 (NEWS.0) = bfcd7c147251b5474d96848c6f57e5a8 MD5 (NEWS.1) = eb78c4d053ec9c32b815cf0c2ebea801 MD5 (NEWS.2) = 8e2f4d1d5228663ae598a09bf1e2bc6b MD5 (R-latest.tar.gz) = 2437014ef40641cdc9673e89c040b7a8 MD5 (README) = f468f281c919665e276a1b691decbbe6 MD5 (RESOURCES) = 529223fd3ffef95731d0a87353108435 MD5 (THANKS) = f80d02e7ba9729a927e1c9cf7b435b32 MD5 (VERSION-INFO.dcf) = c643e0eb5a8e98b034f76287c574be32 MD5 (R-3/R-3.3.2.tar.gz) = 2437014ef40641cdc9673e89c040b7a8 This is the relevant part of the NEWS file CHANGES IN R 3.3.2: NEW FEATURES: * extSoftVersion() now reports the version (if any) of the readline library in use. * The version of LAPACK included in the sources has been updated to 3.6.1, a bug-fix release including a speedup for the non-symmetric case of eigen(). * Use options(deparse.max.lines=) to limit the number of lines recorded in .Traceback and other deparsing activities. * format(<AsIs>) looks more regular, also for non-character atomic matrices. * abbreviate() gains an option named = TRUE. * The online documentation for package methods is extensively rewritten. The goals are to simplify documentation for basic use, to note old features not recommended and to correct out-of-date information. * Calls to setMethod() no longer print a message when creating a generic function in those cases where that is natural: S3 generics and primitives. INSTALLATION and INCLUDED SOFTWARE: * Versions of the readline library >= 6.3 had been changed so that terminal window resizes were not signalled to readline: code has been added using a explicit signal handler to work around that (when R is compiled against readline >= 6.3). (PR#16604) * configure works better with Oracle Developer Studio 12.5. UTILITIES: * R CMD check reports more dubious flags in files src/Makevars[.in], including -w and -g. * R CMD check has been set up to filter important warnings from recent versions of gfortran with -Wall -pedantic: this now reports non-portable GNU extensions such as out-of-order declarations. * R CMD config works better with paths containing spaces, even those of home directories (as reported by Ken Beath). DEPRECATED AND DEFUNCT: * Use of the C/C++ macro NO_C_HEADERS is deprecated (no C headers are included by R headers from C++ as from R 3.3.0, so it should no longer be needed). BUG FIXES: * The check for non-portable flags in R CMD check could be stymied by src/Makevars files which contained targets. * (Windows only) When using certain desktop themes in Windows 7 or higher, Alt-Tab could cause Rterm to stop accepting input. (PR#14406; patch submitted by Jan Gleixner.) * pretty(d, ..) behaves better for date-time d (PR#16923). * When an S4 class name matches multiple classes in the S4 cache, perform a dynamic search in order to obey namespace imports. This should eliminate annoying messages about multiple hits in the class cache. Also, pass along the package from the ClassExtends object when looking up superclasses in the cache. * sample(NA_real_) now works. * Packages using non-ASCII encodings in their code did not install data properly on systems using different encodings. * merge(df1, df2) now also works for data frames with column names "na.last", "decreasing", or "method". (PR#17119) * contour() caused a segfault if the labels argument had length zero. (Reported by Bill Dunlap.) * unique(warnings()) works more correctly, thanks to a new duplicated.warnings() method. * findInterval(x, vec = numeric(), all.inside = TRUE) now returns 0s as documented. (Reported by Bill Dunlap.) * (Windows only) R CMD SHLIB failed when a symbol in the resulting library had the same name as a keyword in the .def file. (PR#17130) * pmax() and pmin() now work with (more ?) classed objects, such as "Matrix" from the Matrix package, as documented for a long time. * axis(side, x = D) and hence Axis() and plot() now work correctly for "Date" and time objects D, even when "time goes backward", e.g., with decreasing xlim. (Reported by William May.) * str(I(matrix(..))) now looks as always intended. * plot.ts(), the plot() method for time series, now respects cex, lwd and lty. (Reported by Greg Werbin.) * parallel::mccollect() now returns a named list (as documented) when called with wait = FALSE. (Reported by Michel Lang.) * If a package added a class to a class union in another package, loading the first package gave erroneous warnings about "undefined subclass". * c()'s argument use.names is documented now, as belonging to the (C internal) default method. In "parallel", argument recursive is also moved from the generic to the default method, such that the formal argument list of base generic c() is just (...). * rbeta(4, NA) and similarly rgamma() and rnbinom() now return NaN's with a warning, as other r<dist>(), and as documented. (PR#17155) * Using options(checkPackageLicense = TRUE) no longer requires acceptance of the licence for non-default standard packages such as compiler. (Reported by Mikko Korpela.) * split(<very_long>, *) now works even when the split off parts are long. (PR#17139) * min() and max() now also work correctly when the argument list starts with character(0). (PR#17160) * Subsetting very large matrices (prod(dim(.)) >= 2^31) now works thanks to Michael Schubmehl's PR#17158. * bartlett.test() used residual sums of squares instead of variances, when the argument was a list of lm objects. (Reported by Jens Ledet Jensen). * plot(<lm>, which = *) now correctly labels the contour lines for the standardized residuals for which = 6. It also takes the correct p in case of singularities (also for which = 5). (PR#17161) * xtabs(~ exclude) no longer fails from wrong scope, thanks to Suharto Anggono's PR#17147. * Reference class calls to methods() did not re-analyse previously defined methods, meaning that calls to methods defined later would fail. (Reported by Charles Tilford). * findInterval(x, vec, left.open = TRUE) misbehaved in some cases. (Reported by Dmitriy Chernykh.) -- Peter Dalgaard, Professor, Center for Statistics, Copenhagen Business School Solbjerg Plads 3, 2000 Frederiksberg, Denmark Phone: (+45)38153501 Office: A 4.23 Email: pd.mes at cbs.dk Priv: PDalgd at gmail.com