Hi all,
I am installing rgdal package in linux for R, and got the error below. I
typed: $ install.packages("rgdal", repos=
"http://cran.us.r-project.org")
What is the problem and how to correct it? Thanks for your kind help.
============================== print the error message here
downloaded 1.6 MB
* installing *source* package ?rgdal? ...
** package ?rgdal? successfully unpacked and MD5 sums checked
configure: R_HOME: /usr/lib64/R
configure: CC: gcc -m64 -std=gnu99
configure: CXX: g++ -m64
configure: C++11 support available
configure: rgdal: 1.3-4
checking for /usr/bin/svnversion... yes
configure: svn revision: 766
checking for gdal-config... no
no
configure: error: gdal-config not found or not executable.
ERROR: configuration failed for package ?rgdal?
* removing ?/directory/R/x86_64-redhat-linux-gnu-library/3.5/rgdal?
The downloaded source packages are in
?/tmp/RtmpplM8mi/downloaded_packages?
Warning message:
In install.packages("rgdal") :
installation of package ?rgdal? had non-zero exit status
[[alternative HTML version deleted]]
Hi Lily, did you install gdal on your system? Best, Albrecht -- Albrecht Kauffmann alkauffm at fastmail.fm Am Di, 18. Sep 2018, um 08:59, schrieb lily li:> Hi all, > > I am installing rgdal package in linux for R, and got the error below. I > typed: $ install.packages("rgdal", repos= "http://cran.us.r-project.org") > > What is the problem and how to correct it? Thanks for your kind help. > > ============================== print the error message here > > downloaded 1.6 MB > > > * installing *source* package ?rgdal? ... > > ** package ?rgdal? successfully unpacked and MD5 sums checked > > configure: R_HOME: /usr/lib64/R > > configure: CC: gcc -m64 -std=gnu99 > > configure: CXX: g++ -m64 > > configure: C++11 support available > > configure: rgdal: 1.3-4 > > checking for /usr/bin/svnversion... yes > > configure: svn revision: 766 > > checking for gdal-config... no > > no > > configure: error: gdal-config not found or not executable. > > ERROR: configuration failed for package ?rgdal? > > * removing ?/directory/R/x86_64-redhat-linux-gnu-library/3.5/rgdal? > > > The downloaded source packages are in > > ?/tmp/RtmpplM8mi/downloaded_packages? > > Warning message: > > In install.packages("rgdal") : > > installation of package ?rgdal? had non-zero exit status > > [[alternative HTML version deleted]] > > ______________________________________________ > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code.
Read [1], in particular about System Requirements. Some packages have underlying configuration that needs to be handled through your operating system before the package can be installed. [1] https://cran.r-project.org/web/packages/rgdal/index.html On September 17, 2018 11:59:05 PM PDT, lily li <chocold12 at gmail.com> wrote:>Hi all, > >I am installing rgdal package in linux for R, and got the error below. >I >typed: $ install.packages("rgdal", repos>"http://cran.us.r-project.org") > >What is the problem and how to correct it? Thanks for your kind help. > >============================== print the error message here > >downloaded 1.6 MB > > >* installing *source* package ?rgdal? ... > >** package ?rgdal? successfully unpacked and MD5 sums checked > >configure: R_HOME: /usr/lib64/R > >configure: CC: gcc -m64 -std=gnu99 > >configure: CXX: g++ -m64 > >configure: C++11 support available > >configure: rgdal: 1.3-4 > >checking for /usr/bin/svnversion... yes > >configure: svn revision: 766 > >checking for gdal-config... no > >no > >configure: error: gdal-config not found or not executable. > >ERROR: configuration failed for package ?rgdal? > >* removing ?/directory/R/x86_64-redhat-linux-gnu-library/3.5/rgdal? > > >The downloaded source packages are in > >?/tmp/RtmpplM8mi/downloaded_packages? > >Warning message: > >In install.packages("rgdal") : > > installation of package ?rgdal? had non-zero exit status > > [[alternative HTML version deleted]] > >______________________________________________ >R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see >https://stat.ethz.ch/mailman/listinfo/r-help >PLEASE do read the posting guide >http://www.R-project.org/posting-guide.html >and provide commented, minimal, self-contained, reproducible code.-- Sent from my phone. Please excuse my brevity.