Ranjan Maitra
2015-Apr-19 03:06 UTC
[R] R code/package for calculation of Wasserstein distance between two densities
Dear friends, Before reinventing the wheel, I was wondering if anyone can point me to code for calculating the Wasserstein distance between two densities. I am particularly interested in mixture densities (in functional form). I know that we have the earthmovers distance in R via the emdist package but it appears to me upon a quick look that this can not handle densities in functional form. So, I was wondering if anyone had any ideas on code for this problem. Many thanks and best wishes, Ranjan ____________________________________________________________ Can't remember your password? Do you need a strong and secure password? Use Password manager! It stores your passwords & protects your account.
Dennis Murphy
2015-Apr-20 18:27 UTC
[R] R code/package for calculation of Wasserstein distance between two densities
Hi Ranjan: Try this: library(sos) findFn("Wasserstein") It appears there are three packages that might be relevant: HistDAWass, transport and TDA. HTH, Dennis On Sat, Apr 18, 2015 at 8:06 PM, Ranjan Maitra <maitra.mbox.ignored at inbox.com> wrote:> Dear friends, > > Before reinventing the wheel, I was wondering if anyone can point me to code for calculating the Wasserstein distance between two densities. I am particularly interested in mixture densities (in functional form). I know that we have the earthmovers distance in R via the emdist package but it appears to me upon a quick look that this can not handle densities in functional form. So, I was wondering if anyone had any ideas on code for this problem. > > Many thanks and best wishes, > Ranjan > > ____________________________________________________________ > Can't remember your password? Do you need a strong and secure password? > Use Password manager! It stores your passwords & protects your account. > > ______________________________________________ > R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code.