Tousey, Colton
2018-Apr-18 21:08 UTC
[Rd] R Bug: write.table for matrix of more than 2, 147, 483, 648 elements
Hello, I want to report a bug in R that is limiting my capabilities to export a matrix with write.csv or write.table with over 2,147,483,648 elements (C's int limit). I found this bug already reported about before: https://bugs.r-project.org/bugzilla/show_bug.cgi?id=17182. However, there appears to be no solution or fixes in upcoming R version releases. The error message is coming from the writetable part of the utils package in the io.c source code(https://svn.r-project.org/R/trunk/src/library/utils/src/io.c): /* quick integrity check */ if(XLENGTH(x) != (R_len_t)nr * nc) error(_("corrupt matrix -- dims not not match length")); The issue is that nr*nc is an integer and the size of my matrix, 2.8 billion elements, exceeds C's limit, so the check forces the code to fail. My version:> R.Version()$platform [1] "x86_64-w64-mingw32" $arch [1] "x86_64" $os [1] "mingw32" $system [1] "x86_64, mingw32" $status [1] "" $major [1] "3" $minor [1] "4.3" $year [1] "2017" $month [1] "11" $day [1] "30" $`svn rev` [1] "73796" $language [1] "R" $version.string [1] "R version 3.4.3 (2017-11-30)" $nickname [1] "Kite-Eating Tree" Thank you, Colton Colton Tousey Research Associate II P: 816.585.0300 E: colton.tousey at kc.frb.org FEDERAL RESERVE BANK OF KANSAS CITY 1 Memorial Drive * Kansas City, Missouri 64198 * www.kansascityfed.org [[alternative HTML version deleted]]
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