Sariya, Sanjeev
2018-Feb-01 14:50 UTC
[R] Error while working with png output on linux server
I'm working on linux server: Linux 4.9.0-4-amd64 #1 SMP Debian 4.9.51-1 (2017-09-28) x86_64 GNU/Linux I get error while creating png files. I'm sharing my commands and error while I run those commands:>png("abc", type="cairo")Error in .External2(C_X11, paste0("png::", filename), g$width, g$height, : unable to start device PNG In addition: Warning message: In png("abc", type = "cairo") : unable to open connection to X11 display ''> png("apoeqqplot.png", res=600)Error in .External2(C_X11, paste0("png::", filename), g$width, g$height, : unable to start device PNG In addition: Warning message: In png("apoeqqplot.png", res = 600) : unable to open connection to X11 display '' dev.off() R version 3.4.2 (2017-09-28) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Debian GNU/Linux 9 (stretch) Matrix products: default BLAS: /mnt/mfs/cluster/bin/R-3.4/lib/libRblas.so LAPACK: /mnt/mfs/cluster/bin/R-3.4/lib/libRlapack.so locale: [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 [7] LC_PAPER=en_US.UTF-8 LC_NAME=C [9] LC_ADDRESS=C LC_TELEPHONE=C [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] CMplot_3.3.1 loaded via a namespace (and not attached): [1] compiler_3.4.2 tools_3.4.2 How do I fix this? [[alternative HTML version deleted]]
Jeff Newmiller
2018-Feb-01 15:11 UTC
[R] Error while working with png output on linux server
FAQ 7.19? Also, read the Posting Guide, in particular about posting using plain text. -- Sent from my phone. Please excuse my brevity. On February 1, 2018 6:50:42 AM PST, "Sariya, Sanjeev" <ss5505 at cumc.columbia.edu> wrote:>I'm working on linux server: >Linux 4.9.0-4-amd64 #1 SMP Debian 4.9.51-1 (2017-09-28) x86_64 >GNU/Linux > >I get error while creating png files. I'm sharing my commands and error >while I run those commands: > >>png("abc", type="cairo") >Error in .External2(C_X11, paste0("png::", filename), g$width, >g$height, : > unable to start device PNG >In addition: Warning message: >In png("abc", type = "cairo") : unable to open connection to X11 >display '' > >> png("apoeqqplot.png", res=600) >Error in .External2(C_X11, paste0("png::", filename), g$width, >g$height, : > unable to start device PNG >In addition: Warning message: >In png("apoeqqplot.png", res = 600) : > unable to open connection to X11 display '' > >dev.off() > >R version 3.4.2 (2017-09-28) >Platform: x86_64-pc-linux-gnu (64-bit) >Running under: Debian GNU/Linux 9 (stretch) > >Matrix products: default >BLAS: /mnt/mfs/cluster/bin/R-3.4/lib/libRblas.so >LAPACK: /mnt/mfs/cluster/bin/R-3.4/lib/libRlapack.so > >locale: >[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C >[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 >[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 >[7] LC_PAPER=en_US.UTF-8 LC_NAME=C >[9] LC_ADDRESS=C LC_TELEPHONE=C >[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C > >attached base packages: >[1] stats graphics grDevices utils datasets methods base > >other attached packages: >[1] CMplot_3.3.1 > >loaded via a namespace (and not attached): >[1] compiler_3.4.2 tools_3.4.2 > > >How do I fix this? > > > [[alternative HTML version deleted]] > >______________________________________________ >R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see >https://stat.ethz.ch/mailman/listinfo/r-help >PLEASE do read the posting guide >http://www.R-project.org/posting-guide.html >and provide commented, minimal, self-contained, reproducible code.
Sariya, Sanjeev
2018-Feb-01 15:18 UTC
[R] Error while working with png output on linux server
Thanks for pointing to FAQ: I tried with cairo (shared in commands), unfortunately didn't work. -- Sanjeev Sariya -----Original Message----- From: Jeff Newmiller [mailto:jdnewmil at dcn.davis.ca.us] Sent: Thursday, February 01, 2018 10:12 AM To: r-help at r-project.org; Sariya, Sanjeev <ss5505 at cumc.columbia.edu>; r-help at r-project.org Subject: Re: [R] Error while working with png output on linux server FAQ 7.19? Also, read the Posting Guide, in particular about posting using plain text. -- Sent from my phone. Please excuse my brevity. On February 1, 2018 6:50:42 AM PST, "Sariya, Sanjeev" <ss5505 at cumc.columbia.edu> wrote:>I'm working on linux server: >Linux 4.9.0-4-amd64 #1 SMP Debian 4.9.51-1 (2017-09-28) x86_64 >GNU/Linux > >I get error while creating png files. I'm sharing my commands and error >while I run those commands: > >>png("abc", type="cairo") >Error in .External2(C_X11, paste0("png::", filename), g$width, >g$height, : > unable to start device PNG >In addition: Warning message: >In png("abc", type = "cairo") : unable to open connection to X11 >display '' > >> png("apoeqqplot.png", res=600) >Error in .External2(C_X11, paste0("png::", filename), g$width, >g$height, : > unable to start device PNG >In addition: Warning message: >In png("apoeqqplot.png", res = 600) : > unable to open connection to X11 display '' > >dev.off() > >R version 3.4.2 (2017-09-28) >Platform: x86_64-pc-linux-gnu (64-bit) >Running under: Debian GNU/Linux 9 (stretch) > >Matrix products: default >BLAS: /mnt/mfs/cluster/bin/R-3.4/lib/libRblas.so >LAPACK: /mnt/mfs/cluster/bin/R-3.4/lib/libRlapack.so > >locale: >[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C >[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 >[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 >[7] LC_PAPER=en_US.UTF-8 LC_NAME=C >[9] LC_ADDRESS=C LC_TELEPHONE=C >[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C > >attached base packages: >[1] stats graphics grDevices utils datasets methods base > >other attached packages: >[1] CMplot_3.3.1 > >loaded via a namespace (and not attached): >[1] compiler_3.4.2 tools_3.4.2 > > >How do I fix this? > > > [[alternative HTML version deleted]] > >______________________________________________ >R-help at r-project.org mailing list -- To UNSUBSCRIBE and more, see >https://stat.ethz.ch/mailman/listinfo/r-help >PLEASE do read the posting guide >http://www.R-project.org/posting-guide.html >and provide commented, minimal, self-contained, reproducible code.