I found a hack to avoid this bug(?): My personal .Rprofile file loads
'survival'. The hack is to remove/rename the file.
Another hack is to log in (su -) as root (sudo -s doesn't help).
This behaviour is also present when I run 'update.packages', even if I
start R by 'sudo R --vanilla'! I have reported this to R-help.
Should I report this to R-bugs?
G?ran
G?ran Brostr?m wrote:> I'm trying to build R-patched_2010-02-17.tar.gz, 'make' ends
with
>
> make[2]: Entering directory
> `/usr/local/src/R/R-patched/src/library/Recommended'
> begin installing recommended package boot
> Loading required package: survival
> Error: package 'survival' could not be loaded
> In addition: Warning message:
> In library(pkg, character.only = TRUE, logical.return = TRUE, lib.loc =
> lib.loc) :
> there is no package called 'survival'
> Execution halted
> make[2]: *** [boot.ts] Error 1
> make[2]: Leaving directory
> `/usr/local/src/R/R-patched/src/library/Recommended'
> make[1]: *** [recommended-packages] Error 2
> make[1]: Leaving directory
> `/usr/local/src/R/R-patched/src/library/Recommended'
> make: *** [stamp-recommended] Error 2
>
> # uname -a
> Linux tal 2.6.31-19-generic #56-Ubuntu SMP Thu Jan 28 02:39:34 UTC 2010
> x86_64 GNU/Linux
>
> G?ran
>
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--
G?ran Brostr?m phone: +46 90 786 5223
Department of Statistics, fax: +46 90 786 6614
Ume? University email: gb at stat.umu.se
SE-90187 Ume?, Sweden http://tal.stat.umu.se/~gb