erikl at phonetik.uni-muenchen.de
2009-Feb-05 08:15 UTC
[Rd] JGR extension not working (PR#13501)
Full_Name: Erik Lukac Version: R version 2.8.1 (2008-12-22) OS: Mac OS 10.5 Submission from: (NULL) (141.84.28.167) I tried to install JGR, but somehow it doesnt work.> install.packages("JGR")Warning in install.packages("JGR") : argument 'lib' is missing: using '/Users/erikl/R/i386-apple-darwin9.6.0-library/2.8' trying URL 'http://cran.rakanu.com/src/contrib/JGR_1.6-2.tar.gz' Content type 'application/x-gzip' length 428978 bytes (418 Kb) opened URL =================================================downloaded 418 Kb * Installing *source* package 'JGR' ... ** R ** inst ** preparing package for lazy loading Loading required package: rJava Loading required package: JavaGD Loading required package: iplots Note: On Mac OS X we strongly recommend using iplots from within JGR. Proceed at your own risk as iplots cannot resolve potential ev.loop deadlocks. 'Yes' is assumed for all dialogs as they cannot be shown without a deadlock, also ievent.wait() is disabled. 2009-02-05 09:04:31.028 R[6886:613] Apple AWT Java VM was loaded on first thread -- can't start AWT. Warning in .jnew("org/rosuda/iplots/Framework") : NewObject("org/rosuda/iplots/Framework","()V",...) failed Exception in thread "main" java.lang.InternalError: Can't start the AWT because Java was started on the first thread. Make sure StartOnFirstThread is not specified in your application's Info.plist or on the command line at java.lang.ClassLoader$NativeLibrary.load(Native Method) at java.lang.ClassLoader.loadLibrary0(ClassLoader.java:1822) at java.lang.ClassLoader.loadLibrary(ClassLoader.java:1723) at java.lang.Runtime.loadLibrary0(Runtime.java:822) at java.lang.System.loadLibrary(System.java:993) at sun.security.action.LoadLibraryAction.run(LoadLibraryAction.java:50) at java.security.AccessController.doPrivileged(Native Method) at java.awt.Toolkit.loadLibraries(Toolkit.java:1509) at java.awt.Toolkit.<clinit>(Toolkit.java:1530) at java.awt.Color.<clinit>(Color.java:250) at org.rosuda.ibase.Common.<clinit>(Common.java:47) at org.rosuda.iplots.Framework.<init>(Framework.java:43) Error in .jnew("org/rosuda/iplots/Framework") : Failed to create object of class `org/rosuda/iplots/Framework' Error: package 'iplots' could not be loaded Execution halted ERROR: lazy loading failed for package 'JGR' ** Removing '/Users/erikl/R/i386-apple-darwin9.6.0-library/2.8/JGR' The downloaded packages are in /private/var/folders/Vg/Vgf6mZdSH8mlJdsK7HKoA++++TI/-Tmp-/RtmpgsoIqo/downloaded_packages Warning message: In install.packages("JGR") : installation of package 'JGR' had non-zero exit status
Erik, fist, this is not a bug in R (not a bug at all, really), so we specifically ask you to not waste other people's time and report it to the maintainers. It is about a contributed package and there is a mailing list specifically for JGR http://mailman.rz.uni-augsburg.de/mailman/listinfo/stats-rosuda-devel In addition, you are apparently using a custom-built R so you are expected to know what you're doing. If you had used the R binary from CRAN all would work. If you insist on compiling it from sources you have to set NOAWT=1 and install latest iplots in order to prevent AWT from starting since it's not supported on Mac OS X 10.5 inside single- threaded applications (such as R). Cheers, Simon On Feb 5, 2009, at 3:15 , erikl at phonetik.uni-muenchen.de wrote:> Full_Name: Erik Lukac > Version: R version 2.8.1 (2008-12-22) > OS: Mac OS 10.5 > Submission from: (NULL) (141.84.28.167) > > > I tried to install JGR, but somehow it doesnt work. > > >> install.packages("JGR") > Warning in install.packages("JGR") : > argument 'lib' is missing: using > '/Users/erikl/R/i386-apple-darwin9.6.0-library/2.8' > trying URL 'http://cran.rakanu.com/src/contrib/JGR_1.6-2.tar.gz' > Content type 'application/x-gzip' length 428978 bytes (418 Kb) > opened URL > =================================================> downloaded 418 Kb > > * Installing *source* package 'JGR' ... > ** R > ** inst > ** preparing package for lazy loading > Loading required package: rJava > Loading required package: JavaGD > Loading required package: iplots > Note: On Mac OS X we strongly recommend using iplots from within JGR. > Proceed at your own risk as iplots cannot resolve potential ev.loop > deadlocks. > 'Yes' is assumed for all dialogs as they cannot be shown without a > deadlock, > also ievent.wait() is disabled. > 2009-02-05 09:04:31.028 R[6886:613] Apple AWT Java VM was loaded on > first thread > -- can't start AWT. > Warning in .jnew("org/rosuda/iplots/Framework") : > NewObject("org/rosuda/iplots/Framework","()V",...) failed > Exception in thread "main" java.lang.InternalError: Can't start the > AWT because > Java was started on the first thread. Make sure StartOnFirstThread > is not > specified in your application's Info.plist or on the command line > at java.lang.ClassLoader$NativeLibrary.load(Native Method) > at java.lang.ClassLoader.loadLibrary0(ClassLoader.java:1822) > at java.lang.ClassLoader.loadLibrary(ClassLoader.java:1723) > at java.lang.Runtime.loadLibrary0(Runtime.java:822) > at java.lang.System.loadLibrary(System.java:993) > at sun.security.action.LoadLibraryAction.run(LoadLibraryAction.java: > 50) > at java.security.AccessController.doPrivileged(Native Method) > at java.awt.Toolkit.loadLibraries(Toolkit.java:1509) > at java.awt.Toolkit.<clinit>(Toolkit.java:1530) > at java.awt.Color.<clinit>(Color.java:250) > at org.rosuda.ibase.Common.<clinit>(Common.java:47) > at org.rosuda.iplots.Framework.<init>(Framework.java:43) > Error in .jnew("org/rosuda/iplots/Framework") : > Failed to create object of class `org/rosuda/iplots/Framework' > Error: package 'iplots' could not be loaded > Execution halted > ERROR: lazy loading failed for package 'JGR' > ** Removing '/Users/erikl/R/i386-apple-darwin9.6.0-library/2.8/JGR' > > The downloaded packages are in > /private/var/folders/Vg/Vgf6mZdSH8mlJdsK7HKoA++++TI/-Tmp-/ > RtmpgsoIqo/downloaded_packages > Warning message: > In install.packages("JGR") : > installation of package 'JGR' had non-zero exit status > > ______________________________________________ > R-devel at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel > >