On Fri, 8 Feb 2002, Jan de Leeuw wrote:> Here is the same thing as before, now done a bit more systematically. The > rather bad performance of R-patched on eigen is a mystery (to me), the > gain > in La.eigen when using ATLAS is probably not Altivec, but using > threaded level 3 BLAS on a dual processor machine.Well, it's almost entirely in the algorithm used in LAPACK. There is no single precision used. DSYEVR was designed as `the holy grail' for that problem, and it uses level 3 BLAS much better than its predecessors. I see an 8x speed up on my PIII Linux box on your tests (and the ATLAS there is only using one processor to keep the build portable). My guess (and only a guess) is that you have an alignment problem. I am pretty sure there is no change in the internal code across the versions you used, but some compilers and chips will run code much faster with certain alignments than others. Sparc for example needs -dalign under it's native compiler, and without that (which used to be necessary under S-PLUS) there could be performance changes of this nature under very small code changes. -- Brian D. Ripley, ripley@stats.ox.ac.uk Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ University of Oxford, Tel: +44 1865 272861 (self) 1 South Parks Road, +44 1865 272860 (secr) Oxford OX1 3TG, UK Fax: +44 1865 272595 -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-devel mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or "[un]subscribe" (in the "body", not the subject !) To: r-devel-request@stat.math.ethz.ch _._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._
--Apple-Mail-1-507788993 Content-Transfer-Encoding: 7bit Content-Type: text/plain; charset=US-ASCII; format=flowed Here is the same thing as before, now done a bit more systematically. The rather bad performance of R-patched on eigen is a mystery (to me), the gain in La.eigen when using ATLAS is probably not Altivec, but using threaded level 3 BLAS on a dual processor machine. --Apple-Mail-1-507788993 Content-Disposition: attachment; filename=timing.pdf Content-Transfer-Encoding: base64 Content-Type: application/pdf; x-unix-mode=0644; name="timing.pdf" JVBERi0xLjMKMyAwIG9iaiA8PAovTGVuZ3RoIDEzODAgICAgICAKL0ZpbHRlciAvRmxhdGVEZWNv ZGUKPj4Kc3RyZWFtCnjafRfLcts47O6v8G3lGYvhUxL35jpJN50m3TruNjNtD4qsxJoqlleW67Zf vwBByS9lRweAIADiTUoMOXxiKI1h0sphpDQTPB5mL4M388HFtYmHQjBrzHD+5Fjniy/B/Ob25u7t KFTSBLeTkTHBlBazP+5H3+bvLq5FNLTMRgqlhGEK1qG0LEkSp+DdKOLB5G4USsODyyuC76+uPn0m 8UgenBozE4lhaCTTJnLi047Lwp5GpoSZWHrzPozCSAagPRLB3OFXDr9zOFH2du4PCoVOmBAKTOXM SuGUCTYKBec8uFk1dbXYZk1RrcBgkfAoEKgFTg2FYlaTb7IVeJOvsuVLWn8Hbik0D2QPt2q5p2n9 6BRDJH6MhAnyekMn8UjGJ7Kxlz0wjiQ/3BN8wDOjKH7lTHkqNy3TzabIUIrLJFC9Uuq10ywolBgT ldgTWbJUt5KXab0rvPQ/IyHEgZtaR4HuOVjv3ZyRpGBAA1TxRL0i0nk4C9dpky3zhcuZ5YHp5Vd7 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======================================================= No matter where you go, there you are. --- Buckaroo Banzai http://www.stat.ucla.edu/~deleeuw/sounds/nomatter.au ======================================================= --Apple-Mail-1-507788993-- -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-devel mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or "[un]subscribe" (in the "body", not the subject !) 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