Liaw, Andy
2002-Jan-17 20:17 UTC
[Rd] solved(?) (was RE: MKL seems to beat ATLAS, but some problems...)
Prof. Ripley,> > Sorry, but seems like I need a bit more spoon-feeding: > > I did the dyn.load, and got: > > unable to load shared library > > "/home/andy/R-patched-mkl/modules/lapack.so": > > /home/andy/R-patched-mkl/modules/lapack.so: undefined > symbol: lsame_ > > Right, that's it. LSAME is a BLAS routine, and your BLAS doesn't have > it. There is a version in src/appl/blas.f, but you don't seem to > have a complete BLAS to link against.Strangely, I found lsame in libmkl_lapack.a (which I guess is the Lapack part of MKL). I did a real ugly hack: I inserted the link flags to this library in RHOME/src/modules/lapack/Makefile, where lapack.so is built. That seems to have solved the problem. The resulting build passes make check w/o any error.> If you really have a complete LAPACK3 (which I would not bet on) > you can try building in src/modules/lapack omitting double.f and > complex.f: you will need to rename a few entry points in Lapack.h > as they have already been changed to avoid conflicts with sunperf > (I think). See also the comments in the README there.I think I'll just follow the advise in that README file, at least for now... Thanks very much for your help! Regards, Andy -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-devel mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or "[un]subscribe" (in the "body", not the subject !) To: r-devel-request@stat.math.ethz.ch _._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._
Possibly Parallel Threads
- MKL seems to beat ATLAS, but some problems... (was RE: li nkin g R against MKL)
- MKL seems to beat ATLAS, but some problems... (was RE: li nkin g R against MKL)
- MKL seems to beat ATLAS, but some problems... (was RE: linkin g R against MKL)
- Out of date instructions to build R using MKL
- Build optimized R : openblas, MKL, ATLAS