Displaying 18 results from an estimated 18 matches for "dmpi2".
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mpi2
2007 Jul 23
1
Rmpi installation error
...atus: creating src/Makevars
** libs
gcc -I/usr/local/lib64/R/include -I/usr/local/lib64/R/include -DPACKAGE_NAME
=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -D
PACKAGE_BUGREPORT=\"\" -I/usr/local/mpich-1.2.7p1/include -DMPI2 -I/usr/loc
al/include -fpic -g -O2 -std=gnu99 -c conversion.c -o conversion.o
gcc -I/usr/local/lib64/R/include -I/usr/local/lib64/R/include -DPACKAGE_NAME
=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -D
PACKAGE_BUGREPORT=\"...
2011 Sep 09
1
R CMD INSTALL configure.args and CC customization
.../config.status
config.status: creating src/Makevars
** libs
gcc -m64 -std=gnu99 -I/usr/include/R -DPACKAGE_NAME=\"\"
-DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\"
-DPACKAGE_BUGREPORT=\"\" -I/usr/lib64/openmpi/1.2.7-gcc/include
-DMPI2 -DOPENMPI -I/usr/local/include -fpic -O2 -g -pipe -Wall
-Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector
--param=ssp-buffer-size=4 -m64 -mtune=generic -c RegQuery.c -o
RegQuery.o
gcc -m64 -std=gnu99 -I/usr/include/R -DPACKAGE_NAME=\"\"
-DPACKAGE_TARNAME=\"\" -DPACKAGE_...
2011 Mar 07
1
Rmpi fails to install
..../config.status
config.status: creating src/Makevars
** libs
x86_64-pc-linux-gnu-gcc -std=gnu99 -I/usr/lib64/R/include
-DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\"
-DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/include -DMPI2
-DOPENMPI -I/usr/local/include -fpic -march=nocona -O2 -pipe
-fomit-frame-pointer -c RegQuery.c -o RegQuery.o
x86_64-pc-linux-gnu-gcc -std=gnu99 -I/usr/lib64/R/include
-DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\"
-DPACKAGE_STRING=\"\"...
2010 Jan 20
0
R CMD INSTALL configure.args and CC customization
.../config.status
config.status: creating src/Makevars
** libs
gcc -m64 -std=gnu99 -I/usr/include/R -DPACKAGE_NAME=\"\"
-DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\"
-DPACKAGE_BUGREPORT=\"\" -I/usr/lib64/openmpi/1.2.7-gcc/include
-DMPI2 -DOPENMPI -I/usr/local/include -fpic -O2 -g -pipe -Wall
-Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector
--param=ssp-buffer-size=4 -m64 -mtune=generic -c RegQuery.c -o
RegQuery.o
gcc -m64 -std=gnu99 -I/usr/include/R -DPACKAGE_NAME=\"\"
-DPACKAGE_TARNAME=\"\" -DPACKAGE_...
2008 Jan 16
3
Rmpi on Linux x86_64 GNU/Linux
...u99 -I/usr/local/pkg/r/r-2.6.1/lib64/R/include
-I/usr/local/pkg/r/r-2.6.1/lib64/R/include -DPACKAGE_NAME=\"\"
-DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\"
-DPACKAGE_BUGREPORT=\"\" -I/import/home/u1/uaf/ogorman/lam/include
-DMPI2 -DLAM -fPIC -I/usr/local/include -fpic -g -O2 -c conversion.c
-o conversion.o
gcc -std=gnu99 -I/usr/local/pkg/r/r-2.6.1/lib64/R/include
-I/usr/local/pkg/r/r-2.6.1/lib64/R/include -DPACKAGE_NAME=\"\"
-DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=...
2009 Feb 06
2
Rmpi Segmentation fault
...creating ./config.status
config.status: creating src/Makevars
** libs
gcc -std=gnu99 -I/usr/local/lib64/R/include -DPACKAGE_NAME=\"\"
-DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\"
-DPACKAGE_BUGREPORT=\"\" -I/usr/local/include -DMPI2 -DOPENMPI -fPIC
-I/usr/local/include -fpic -g -O2 -c conversion.c -o conversion.o
gcc -std=gnu99 -I/usr/local/lib64/R/include -DPACKAGE_NAME=\"\"
-DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\"
-DPACKAGE_BUGREPORT=\"\" -I/usr...
2012 Oct 10
1
Rmpi installation trouble
....status: creating src/Makevars
** libs
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\"
-DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\"
-DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -I/usr/local/include
-DMPI2 -DOPENMPI -fpic -O3 -pipe -g -c RegQuery.c -o RegQuery.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\"
-DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\"
-DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\&qu...
2012 Aug 29
2
Problem installing Rmpi with Open MPI
...tatus: creating src/Makevars
** libs
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\"
-DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\"
-DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -I/usr/local//include -DMPI2
-DOPENMPI -fpic -O3 -pipe -g -c RegQuery.c -o RegQuery.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\"
-DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\"
-DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\&qu...
2013 Jun 07
1
cannot load pbdMPI package after compilation
...e
>> TMP_LIB = /opt/openmpi/1.6.4-1/intel-13.1.1/lib64
>> MPI_ROOT =
>> MPITYPE = OPENMPI
>> MPI_INCLUDE_PATH = /opt/openmpi/1.6.4-1/intel-13.1.1/include
>> MPI_LIBPATH = /opt/openmpi/1.6.4-1/intel-13.1.1/lib64
>> MPI_LIBS = -lutil -lpthread
>> MPI_DEFS = -DMPI2
>> MPI_INCL2 =
>> PKG_CPPFLAGS = -I/opt/openmpi/1.6.4-1/intel-13.1.1/include -DMPI2
-DOPENMPI
>> PKG_LIBS = -L/opt/openmpi/1.6.4-1/intel-13.1.1/lib64 -lmpi -lutil
-lpthread
*************************************************************************
..
icc -std=gnu99 -I/usr/local/R...
2006 Oct 09
2
Installing Rmpi on 64-bit Linux Athlon
...* libs
gcc -I/gcm/home/a347549/local64/lib64/R/include
-I/gcm/home/a347549/local64/lib64/R/include -DPACKAGE_NAME=\"\"
-DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\"
-DPACKAGE_BUGREPORT=\"\" -I/gcm/home/a347549/local64/include -DMPI2
-I/usr/local/include -fpic -g -O2 -std=gnu99 -c RegQuery.c -o
RegQuery.o
gcc -I/gcm/home/a347549/local64/lib64/R/include
-I/gcm/home/a347549/local64/lib64/R/include -DPACKAGE_NAME=\"\"
-DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\"
-D...
2011 Mar 14
1
Installing Rmpi on hpc
..../config.status
config.status: creating src/Makevars
** libs
gcc -std=gnu99 -I/home/bs/R_home/R-2.11.1/include -DPACKAGE_NAME=\"\"
-DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\"
-DPACKAGE_BUGREPORT=\"\" -I/usr/lib/lam/include -DMPI2 -DLAM
-I/usr/local/include -fpic -g -O2 -c RegQuery.c -o RegQuery.o
gcc -std=gnu99 -I/home/bs/R_home/R-2.11.1/include -DPACKAGE_NAME=\"\"
-DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\"
-DPACKAGE_BUGREPORT=\"\" -I/usr/lib/lam...
2007 Apr 24
1
Problem installing Rmpi with lam on SGI SLES9
...tus
config.status: creating src/Makevars
** libs
gcc -I/usr/local/lib/R/include -I/usr/local/lib/R/include
-DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\"
-DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\"
-I/usr/local/lam-mpi/include -DMPI2 -I/usr/local/include -fpic -g
-O2 -std=gnu99 -c RegQuery.c -o RegQuery.o
gcc -I/usr/local/lib/R/include -I/usr/local/lib/R/include
-DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\"
-DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\"
-...
2007 Oct 08
0
shared object for Rmpi
...** libs
gcc -std=gnu99 -I/home/faculty/hodgess/R-2.6.0/include -I/home/faculty/hodgess/R-2.6.0/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/home/faculty/hodgess/include -DMPI2 -fPIC -I/usr/local/include -fpic -g -O2 -c conversion.c -o conversion.o
gcc -std=gnu99 -I/home/faculty/hodgess/R-2.6.0/include -I/home/faculty/hodgess/R-2.6.0/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\"...
2007 Aug 27
2
Rmpi and x86
Dear R Gurus:
Is there a problem with Rmpi on x86 with SUSE 10.1, please?
I've tried everything and it still won't load.
Has anyone else dealt with this please?
Thanks,
Edna Bell
2013 Jun 16
2
Problem in linking a library in R package
...f pbdMPI package configure *****************
>> TMP_INC = F>> TMP_LIB = F>> MPI_ROOT = /usr/lib/openmpi>> MPITYPE = OPENMPI>> MPI_INCLUDE_PATH = /usr/lib/openmpi/include>> MPI_LIBPATH = /usr/lib/openmpi/lib>> MPI_LIBS = -lutil -lpthread>> MPI_DEFS = -DMPI2>> MPI_INCL2 = >> PKG_CPPFLAGS = -I/usr/lib/openmpi/include -DMPI2 -DOPENMPI>> PKG_LIBS = -L/usr/lib/openmpi/lib -lmpi -lutil -lpthread
*************************************************************************
configure: creating ./config.status
config.status: creating src/Makev...
2007 Oct 04
1
Rmpi_0.5-4 and OpenMPI questions
Many thanks to Dr Yu for updating Rmpi for R 2.6.0, and for starting to make
the changes to support Open MPI.
I have just built the updated Debian package of Rmpi (i.e. r-cran-rmpi) under
R 2.6.0 but I cannot convince myself yet whether it works or not. Simple
tests work. E.g. on my Debian testing box, with Rmpi installed directly
using Open Mpi 1.2.3-2 (from Debian) and using 'r' from
2009 Jun 11
1
help installing Rmpi
Hello R users and developers,
I would like to install Rmpi so that I may take advantage of all of
the CPUs in my computer, but I cannot get it to install and I am not
very good with linux so it is adding to the headache. I have looked
through the help archive, but I have not been successful at getting
Rmpi to work. I am not sure if I am even installing openMPI correctly
in linux. I would really
2012 Jul 05
1
trouble installing Rmpi on a debian machine
...\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\"
-DPACKAGE_BUGREPORT=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1
-DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1
-DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1
-DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -I -DMPI2 -DOPENMPI -fpic
-O3 -pipe -g -c RegQuery.c -o RegQuery.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -DPACKAGE_NAME=\"\"
-DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\"
-DPACKAGE_BUGREPORT=\"\" -DSTDC_HEADERS=1 -DHAVE_SY...