On 02/03/2016 09:52 AM, Tom Callaway wrote:> Are you trying to build R and components for i686 rather than x86_64?Never mind. Your logs make it clear that you're building for x86_64. Can you share the output of: pkg-config --list-all |grep libcurl curl-config --libs rpm -V libcurl-devel libcurl I'm honestly baffled as to why the configure script is failing to find libcurl.pc on your system: Package libcurl was not found in the pkg-config search path. Perhaps you should add the directory containing `libcurl.pc' to the PKG_CONFIG_PATH environment variable No package 'libcurl' found Do you have any files installed into /usr/local/ ? ~tom =Red Hat
I used epel to install again. I removed the original installation that seemed from epel also. [root at ping /]# pkg-config --list-all |grep libcurl [root at ping /]# That doesn't look good. [root at ping /]# curl-config --libs Package libcurl was not found in the pkg-config search path. Perhaps you should add the directory containing `libcurl.pc' to the PKG_CONFIG_PATH environment variable No package 'libcurl' found Again not good. [root at ping /]# rpm -V libcurl-devel libcurl prelink: /usr/lib64/libcurl.so.4.1.1: at least one of file's dependencies has changed since prelinking S.?...... /usr/lib64/libcurl.so.4.1.1 Something definitely not looking good here. Thanks, Larry -----Original Message----- From: Tom Callaway [mailto:tcallawa at redhat.com] Sent: Wednesday, February 03, 2016 9:02 AM To: Patrick, Larry B [CSSM] <longplay at iastate.edu>; 'r-sig-fedora at r-project.org' <r-sig-fedora at r-project.org> Subject: Re: [R-sig-Fedora] rstan warning messages On 02/03/2016 09:52 AM, Tom Callaway wrote:> Are you trying to build R and components for i686 rather than x86_64?Never mind. Your logs make it clear that you're building for x86_64. Can you share the output of: pkg-config --list-all |grep libcurl curl-config --libs rpm -V libcurl-devel libcurl I'm honestly baffled as to why the configure script is failing to find libcurl.pc on your system: Package libcurl was not found in the pkg-config search path. Perhaps you should add the directory containing `libcurl.pc' to the PKG_CONFIG_PATH environment variable No package 'libcurl' found Do you have any files installed into /usr/local/ ? ~tom =Red Hat
Umm, which curl-config ? I.e., there might be two of them and you picking up the wrong one. Just a hunch, I am more than rusty on Fedora these days. -pd On 03 Feb 2016, at 16:06 , Patrick, Larry B [CSSM] <longplay at iastate.edu> wrote:> I used epel to install again. I removed the original installation that seemed from epel also. > > [root at ping /]# pkg-config --list-all |grep libcurl > [root at ping /]# > That doesn't look good. > [root at ping /]# curl-config --libs > Package libcurl was not found in the pkg-config search path. > Perhaps you should add the directory containing `libcurl.pc' > to the PKG_CONFIG_PATH environment variable > No package 'libcurl' found > Again not good. > [root at ping /]# rpm -V libcurl-devel libcurl > prelink: /usr/lib64/libcurl.so.4.1.1: at least one of file's dependencies has changed since prelinking > S.?...... /usr/lib64/libcurl.so.4.1.1 > > Something definitely not looking good here. > > Thanks, > Larry > > > -----Original Message----- > From: Tom Callaway [mailto:tcallawa at redhat.com] > Sent: Wednesday, February 03, 2016 9:02 AM > To: Patrick, Larry B [CSSM] <longplay at iastate.edu>; 'r-sig-fedora at r-project.org' <r-sig-fedora at r-project.org> > Subject: Re: [R-sig-Fedora] rstan warning messages > > On 02/03/2016 09:52 AM, Tom Callaway wrote: > >> Are you trying to build R and components for i686 rather than x86_64? > > Never mind. Your logs make it clear that you're building for x86_64. > > Can you share the output of: > > pkg-config --list-all |grep libcurl > curl-config --libs > rpm -V libcurl-devel libcurl > > I'm honestly baffled as to why the configure script is failing to find libcurl.pc on your system: > > Package libcurl was not found in the pkg-config search path. > > Perhaps you should add the directory containing `libcurl.pc' > > to the PKG_CONFIG_PATH environment variable > > No package 'libcurl' found > > Do you have any files installed into /usr/local/ ? > > ~tom > > => Red Hat > > _______________________________________________ > R-SIG-Fedora mailing list > R-SIG-Fedora at r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-fedora-- Peter Dalgaard, Professor, Center for Statistics, Copenhagen Business School Solbjerg Plads 3, 2000 Frederiksberg, Denmark Phone: (+45)38153501 Office: A 4.23 Email: pd.mes at cbs.dk Priv: PDalgd at gmail.com
Both RCurl and rstan seem to have installed now. Did the following on my RHEL6 server: [root at ping ~]# export PKG_CONFIG_PATH=$PKG_CONFIG_PATH:/usr/lib64/pkgconfig/ [root at ping ~]# /usr/bin/curl-config --libs -L/usr/lib64 -lcurl Now the output from your previous commands look like: [root at ping ~]# pkg-config --list-all |grep libcurl libcurl libcurl - Library to transfer files with ftp, http, etc. [root at ping ~]# curl-config --libs -L/usr/lib64 -lcurl [root at ping ~]# rpm -V libcurl-devel libcurl prelink: /usr/lib64/libcurl.so.4.1.1: at least one of file's dependencies has changed since prelinking S.?...... /usr/lib64/libcurl.so.4.1.1 Attached are the long logs from RCurl and rstan. Let me know if you spot something of concern. Hopefully I am good to go now. Thanks for the assist, Larry -----Original Message----- From: R-SIG-Fedora [mailto:r-sig-fedora-bounces at r-project.org] On Behalf Of Patrick, Larry B [CSSM] Sent: Wednesday, February 03, 2016 9:06 AM To: 'Tom Callaway' <tcallawa at redhat.com>; 'r-sig-fedora at r-project.org' <r-sig-fedora at r-project.org> Subject: Re: [R-sig-Fedora] rstan warning messages I used epel to install again. I removed the original installation that seemed from epel also. [root at ping /]# pkg-config --list-all |grep libcurl [root at ping /]# That doesn't look good. [root at ping /]# curl-config --libs Package libcurl was not found in the pkg-config search path. Perhaps you should add the directory containing `libcurl.pc' to the PKG_CONFIG_PATH environment variable No package 'libcurl' found Again not good. [root at ping /]# rpm -V libcurl-devel libcurl prelink: /usr/lib64/libcurl.so.4.1.1: at least one of file's dependencies has changed since prelinking S.?...... /usr/lib64/libcurl.so.4.1.1 Something definitely not looking good here. Thanks, Larry -----Original Message----- From: Tom Callaway [mailto:tcallawa at redhat.com] Sent: Wednesday, February 03, 2016 9:02 AM To: Patrick, Larry B [CSSM] <longplay at iastate.edu>; 'r-sig-fedora at r-project.org' <r-sig-fedora at r-project.org> Subject: Re: [R-sig-Fedora] rstan warning messages On 02/03/2016 09:52 AM, Tom Callaway wrote:> Are you trying to build R and components for i686 rather than x86_64?Never mind. Your logs make it clear that you're building for x86_64. Can you share the output of: pkg-config --list-all |grep libcurl curl-config --libs rpm -V libcurl-devel libcurl I'm honestly baffled as to why the configure script is failing to find libcurl.pc on your system: Package libcurl was not found in the pkg-config search path. Perhaps you should add the directory containing `libcurl.pc' to the PKG_CONFIG_PATH environment variable No package 'libcurl' found Do you have any files installed into /usr/local/ ? ~tom =Red Hat _______________________________________________ R-SIG-Fedora mailing list R-SIG-Fedora at r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-fedora -------------- next part -------------- An embedded and charset-unspecified text was scrubbed... Name: RCurl_log.txt URL: <https://stat.ethz.ch/pipermail/r-sig-fedora/attachments/20160205/5eebb570/attachment-0002.txt> -------------- next part -------------- An embedded and charset-unspecified text was scrubbed... Name: rstan_log.txt URL: <https://stat.ethz.ch/pipermail/r-sig-fedora/attachments/20160205/5eebb570/attachment-0003.txt>