ahenningsen@email.uni-kiel.de
2005-Nov-22 09:25 UTC
[Rd] make check fails for R 2.3.0 (PR#8343)
Full_Name: Arne Henningsen
Version: 2.3.0, 2005-11-21, i686-pc-linux-gnu
OS: SuSE Linux 9.0, Kernel 2.4.21
Submission from: (NULL) (134.245.140.242)
I did not find any problems in "./configure" and "make", but
"make check"
fails:
make[4]: Entering directory `/home/suapm095/Download/R-devel/tests/Examples'
collecting examples for package 'base' ...
make[5]: Entering directory `/home/suapm095/Download/R-devel/src/library'
>>> Building/Updating help pages for package 'base'
Formats: text html latex example
make[5]: Leaving directory `/home/suapm095/Download/R-devel/src/library'
running code in 'base-Ex.R' ...make[4]: *** [base-Ex.Rout] Fehler 1
make[4]: Leaving directory `/home/suapm095/Download/R-devel/tests/Examples'
make[3]: *** [test-Examples-Base] Fehler 2
make[3]: Leaving directory `/home/suapm095/Download/R-devel/tests/Examples'
make[2]: *** [test-Examples] Fehler 2
make[2]: Leaving directory `/home/suapm095/Download/R-devel/tests'
make[1]: *** [test-all-basics] Fehler 1
make[1]: Leaving directory `/home/suapm095/Download/R-devel/tests'
make: *** [check] Fehler 2
At the end of the file "tests/Examples/base-Ex.Rout.fail" I found:
> i39 <- sapply(3:9, seq) # list of vectors
> sapply(i39, fivenum)
[,1] [,2] [,3] [,4] [,5] [,6] [,7]
[1,] 1.0 1.0 1 1.0 1.0 1.0 1
[2,] 1.5 1.5 2 2.0 2.5 2.5 3
[3,] 2.0 2.5 3 3.5 4.0 4.5 5
[4,] 2.5 3.5 4 5.0 5.5 6.5 7
[5,] 3.0 4.0 5 6.0 7.0 8.0 9>
> hist(replicate(100, mean(rexp(10))))
Fehler in hist.default(replicate(100, mean(rexp(10)))) :
invalid number of 'breaks'
Ausf?hrung angehalten
This message is in MIME format. The first part should be readable text, while the remaining parts are likely unreadable without MIME-aware tools. --27464147-1978628741-1132653680=:25449 Content-Type: TEXT/PLAIN; CHARSET=ISO-8859-1; format=flowed Content-Transfer-Encoding: QUOTED-PRINTABLE Content-ID: <Pine.LNX.4.61.0511221102121.26494 at gannet.stats> On Tue, 22 Nov 2005 ahenningsen at email.uni-kiel.de wrote:> Full_Name: Arne Henningsen > Version: 2.3.0, 2005-11-21, i686-pc-linux-gnuPlease use the svn revision for unreleased versions of R. There is no 'R=20 2.3.0' and the version changes several times a day. But we do expect=20 'make check' to have been run successfully on each of those versions.> OS: SuSE Linux 9.0, Kernel 2.4.21 > Submission from: (NULL) (134.245.140.242)You are reporting as a bug in R a problem on your own system in an=20 unreleased ('unstable') version of R. Since it is unstable and=20 unreleased, such things are by definition not bugs in R. Others are not seeing this, so we cannot do anything about the problems=20 seen on your system. This is not at all a new test, and although random=20 it is run with set.seed(1). I can reproduce the result in the output file=20 (on my systems) exactly by> set.seed(1) > hist(replicate(100, mean(rexp(10))))Please see if you can debug it on your own system. (My guess would be=20 that it only occurs as part of the test file.)> I did not find any problems in "./configure" and "make", but "make check" > fails: > > make[4]: Entering directory `/home/suapm095/Download/R-devel/tests/Examples' > collecting examples for package 'base' ... > make[5]: Entering directory `/home/suapm095/Download/R-devel/src/library' > >>> Building/Updating help pages for package 'base' > Formats: text html latex example > make[5]: Leaving directory `/home/suapm095/Download/R-devel/src/library' > running code in 'base-Ex.R' ...make[4]: *** [base-Ex.Rout] Fehler 1 > make[4]: Leaving directory `/home/suapm095/Download/R-devel/tests/Examples' > make[3]: *** [test-Examples-Base] Fehler 2 > make[3]: Leaving directory `/home/suapm095/Download/R-devel/tests/Examples' > make[2]: *** [test-Examples] Fehler 2 > make[2]: Leaving directory `/home/suapm095/Download/R-devel/tests' > make[1]: *** [test-all-basics] Fehler 1 > make[1]: Leaving directory `/home/suapm095/Download/R-devel/tests' > make: *** [check] Fehler 2 > > > At the end of the file "tests/Examples/base-Ex.Rout.fail" I found: > >> i39 <- sapply(3:9, seq) # list of vectors >> sapply(i39, fivenum) > [,1] [,2] [,3] [,4] [,5] [,6] [,7] > [1,] 1.0 1.0 1 1.0 1.0 1.0 1 > [2,] 1.5 1.5 2 2.0 2.5 2.5 3 > [3,] 2.0 2.5 3 3.5 4.0 4.5 5 > [4,] 2.5 3.5 4 5.0 5.5 6.5 7 > [5,] 3.0 4.0 5 6.0 7.0 8.0 9 >> >> hist(replicate(100, mean(rexp(10)))) > Fehler in hist.default(replicate(100, mean(rexp(10)))) : > =09invalid number of 'breaks' > Ausf=FChrung angehalten--=20 Brian D. Ripley, ripley at stats.ox.ac.uk Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ University of Oxford, Tel: +44 1865 272861 (self) 1 South Parks Road, +44 1865 272866 (PA) Oxford OX1 3TG, UK Fax: +44 1865 272595 --27464147-1978628741-1132653680=:25449--
ahenningsen@email.uni-kiel.de
2005-Nov-22 15:19 UTC
[Rd] make check fails for R 2.3.0 (PR#8343)
On Tuesday 22 November 2005 12:55, ripley at stats.ox.ac.uk wrote:> This message is in MIME format. The first part should be readable text, > while the remaining parts are likely unreadable without MIME-aware tools. > > --27464147-1978628741-1132653680=:25449 > Content-Type: TEXT/PLAIN; CHARSET=ISO-8859-1; format=flowed > Content-Transfer-Encoding: QUOTED-PRINTABLE > Content-ID: <Pine.LNX.4.61.0511221102121.26494 at gannet.stats> > > On Tue, 22 Nov 2005 ahenningsen at email.uni-kiel.de wrote: > > Full_Name: Arne Henningsen > > Version: 2.3.0, 2005-11-21, i686-pc-linux-gnu > > Please use the svn revision for unreleased versions of R.OK. I have done this, but the same error still occurs.> There is no 'R= =20 > 2.3.0' and the version changes several times a day. But we do expect=20 > 'make check' to have been run successfully on each of those versions. > > > OS: SuSE Linux 9.0, Kernel 2.4.21 > > Submission from: (NULL) (134.245.140.242) > > You are reporting as a bug in R a problem on your own system in an=20 > unreleased ('unstable') version of R.I used this version to check my R packages because the packages on CRAN are checked by R-devel, too.> Since it is unstable and=20 > unreleased, such things are by definition not bugs in R.Sorry, I did not know this. I thought that my report could help you. The next time when I will find an error in R-devel I won't report it.> Others are not seeing this, so we cannot do anything about the problems=20 > seen on your system. This is not at all a new test, and although random=20 > it is run with set.seed(1). I can reproduce the result in the output file> =20 > (on my systems) exactly by > > > set.seed(1) > > hist(replicate(100, mean(rexp(10)))) > > Please see if you can debug it on your own system. (My guess would be=20 > that it only occurs as part of the test file.)Yes, that's exactly the case. If you want any further information please don't hesitate to contact me. Otherwise I won't bother you anymore with this issue. Best, Arne> > I did not find any problems in "./configure" and "make", but "make check" > > fails: > > > > make[4]: Entering directory > > `/home/suapm095/Download/R-devel/tests/Exampl> > es' > > > collecting examples for package 'base' ... > > make[5]: Entering directory `/home/suapm095/Download/R-devel/src/library' > > > > >>> Building/Updating help pages for package 'base' > > > > Formats: text html latex example > > make[5]: Leaving directory `/home/suapm095/Download/R-devel/src/library' > > running code in 'base-Ex.R' ...make[4]: *** [base-Ex.Rout] Fehler 1 > > make[4]: Leaving directory > > `/home/suapm095/Download/R-devel/tests/Example> > s' > > > make[3]: *** [test-Examples-Base] Fehler 2 > > make[3]: Leaving directory > > `/home/suapm095/Download/R-devel/tests/Example> > s' > > > make[2]: *** [test-Examples] Fehler 2 > > make[2]: Leaving directory `/home/suapm095/Download/R-devel/tests' > > make[1]: *** [test-all-basics] Fehler 1 > > make[1]: Leaving directory `/home/suapm095/Download/R-devel/tests' > > make: *** [check] Fehler 2 > > > > At the end of the file "tests/Examples/base-Ex.Rout.fail" I found: > >> i39 <- sapply(3:9, seq) # list of vectors > >> sapply(i39, fivenum) > > > > [,1] [,2] [,3] [,4] [,5] [,6] [,7] > > [1,] 1.0 1.0 1 1.0 1.0 1.0 1 > > [2,] 1.5 1.5 2 2.0 2.5 2.5 3 > > [3,] 2.0 2.5 3 3.5 4.0 4.5 5 > > [4,] 2.5 3.5 4 5.0 5.5 6.5 7 > > [5,] 3.0 4.0 5 6.0 7.0 8.0 9 > > > >> hist(replicate(100, mean(rexp(10)))) > > > > Fehler in hist.default(replicate(100, mean(rexp(10)))) : > > =09invalid number of 'breaks' > > Ausf=FChrung angehalten > > --=20 > Brian D. Ripley, ripley at stats.ox.ac.uk > Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ > University of Oxford, Tel: +44 1865 272861 (self) > 1 South Parks Road, +44 1865 272866 (PA) > Oxford OX1 3TG, UK Fax: +44 1865 272595 > --27464147-1978628741-1132653680=:25449-- > > ______________________________________________ > R-devel at r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel-- Arne Henningsen Department of Agricultural Economics University of Kiel Olshausenstr. 40 D-24098 Kiel (Germany) Tel: +49-431-880 4445 Fax: +49-431-880 1397 ahenningsen at agric-econ.uni-kiel.de http://www.uni-kiel.de/agrarpol/ahenningsen/
From: ahenningsen at email.uni-kiel.de> > On Tuesday 22 November 2005 12:55, ripley at stats.ox.ac.uk wrote:[snip]> > Since it is unstable and=20 > > unreleased, such things are by definition not bugs in R. > > Sorry, I did not know this. I thought that my report could help you. > The next time when I will find an error in R-devel I won't report it.I do not believe that's the intention. Problem with building R-devel should be reported, but as post to R-devel (the list), rather than filed as bug report. Andy