similar to: Ampersand Crashes Ruby

I am using the Openbase adapter and have had a similar glitch here and there, but after I go into production I consistently get an error on one page. ActionView::TemplateError (NoMemoryError: failed to allocate memory: SELECT * FROM ... I cannot track down the exact location of the error, but the production log says it was around:

Full_Name: Hans Kestler Version: 2.2.0 OS: 10.4.3 Submission from: (NULL) (84.156.184.101) > sam1.out<-sam(raw1[,2:23],raw1.cl,B=0,rand=124) We're doing 319770 complete permutations Error: cannot allocate vector of size 575586 Kb R(572,0xa000ed68) malloc: *** vm_allocate(size=589402112) failed (error code=3) R(572,0xa000ed68) malloc: *** error: can't allocate region

Dear R Experts, I am using R.app (the Mac OS X binary) for neuroimage analysis, so I am loading in some large image files. I get the following error in the middle of my script: > source("3dLME.R") Read 1 record Read 1 record Read 1 record Read 1 record Read 1 record Error: cannot allocate vector of size 3.1 Gb R(2081,0xa000d000) malloc: *** vm_allocate(size=3321675776) failed (error

Dear all, I am having a memory problem when analyzing a rather large data set with nested factors in R. The model is of the form X~A*B*(C/D/F) A,B,C,D,F being the independent variables some of which are nested. The problem occurs when using aov but also when using glm or lme. In particular I get the following response, Error: cannot allocate vector of size 1.6 Gb R(311,0xa000d000) malloc: ***

Hi, I'm Sorry for any cross-posting. I've reviewed the archives and could not find an exact answer to my question below. I'm trying to generate very large sparse matrices (< 1% non-zero entries per row). I have a sparse matrix function below which works well until the row/col count exceeds 10,000. This is being run on a machine with 32G memory: sparse_matrix <-

I want to do an unbalanced anova on 272,992 observations with 405 factors including 2-way interactions between 1 of these factors and the other 404. After fitting only 11 factors and their interactions I get error messages like: Error: cannot allocate vector of size 1433066 Kb R(365,0xa000ed68) malloc: *** vm_allocate(size=1467461632) failed (error code=3) R(365,0xa000ed68) malloc: ***

Hello, all, First thanks in advance for helping me. I am now handling a data frame, dimension 11095400 rows and 4 columns. It seems work perfect in my MAC R (Mac Pro, Intel Chip with 4G RAM) until I was trying to write this file out using the command: write.table(all,file="~/Desktop/alex.lgen",sep=" ",row.names=F,na="0",quote=F,col.names=F) I got the error

Full_Name: Eric Libby Version: 2.1.1 OS: OS Tiger Submission from: (NULL) (65.93.158.117) I am trying to analyze microarray data of 42 human arrays. I typed in the following instructions: library(affy) Data <-ReadAffy() eset <- expresso(Data, normalize.method="invariantset", bg.correct=FALSE, pmcorrect.method="pmonly",summary.method="liwong") And I get some

I''m using ferret (0.9.4) in rails, but outside of the "acts_as_ferret" plugin. Whenever I use a QueryFilter (even a very simple one), the server will crash after one, two, or three reloads of a page (same page, same query, same filter). It''s very non-deterministic and I can''t seem to reproduce it outside of my application environment (I can''t get it

Hi, I am trying to get bootstrap confidence intervals on variance components and related statistics. To calculate the variance components I use the package lme4. > off.fun <- function(data, i){ d <- data[i,] lme1<- lmer(y ~ trt + (trt-1|group), d) VarCorr(lme1)@reSumry$group[2,1] #just as an example } > off.boot <- boot(data=data.sim, statistic=off.fun, R=100) If

Hi all, I am having memory allocation problem with my R 2.2.1 for Mac OS. The following is the error message that I get. I do not get this message if I break down the large dataset in to sub datasets. I think breaking up the dataset is not a sustainable solution in the long run. The data that I am analysing is essentially big, and it would be reasonable to do the analyis on the whole dataset

Hi All, I want to print a square matrix of 7000 x 7000 into a text file. But I got a error after few hours of computation... -------- > write.table(MyDistMxDF, file = "temp.csv", sep=",", quote=F) *** malloc: vm_allocate(size=8421376) failed (error code=3) *** malloc[2889]: error: Can't allocate region Error: vector memory exhausted (limit reached?) *** malloc:

Hello, ive installed successfull diablo 2 LoD within X11 and wine. But now when i try to start lod it says, i need the cd to play. CD is inserted, path in regsitry is exact, mounted it successfull. In the console i get the following error: err:aspi:ASPI_GetNumControllers Could not open HKLM\L"HARDWARE\ \DEVICEMAP\\Scsi" wineserver(4712) malloc: *** vm_allocate(size=4286775296)

Greetings all. I''m using the Microsoft "NorthWind Traders" database "orders" table as test data for the Rico LiveGrid JavaScript. The problem I''m noticing is that some of the records in the "ShipName" field contain ampersands -- which for some reason are not being escaped by Rails. Rails does in fact automatically escape all of the other

Hi All, Dovecot 1.0.rc7 Not sure if this is a problem with Outlook, or with Dovecot, or to do with encoding in Linux. Whenever a user enters an ampersand into an IMAP folder name, it dissapears from outlook. These folders appear on the ext3 filesystem as &- for example drwx------ 5 mailusers mailusers 4096 2006-10-10 17:54 .INBOX.Networks.London Networks.NDCs.WH&-P joint working

Hi, I have been playing around with the autocomplete field in Rails 0.13. I have noticed that if I have an ampersand in the value such as "A&E", if I click on the entry in the autocomplete list, I am left with just A in the text box. I have narrowed it down to: String.unescapeHtml() in prototype.js as what strips the & and what follows it from the value. It strips it

Wine has been working great on my Mac, but when I tried to start Black & White after installing, I can't get it open because the filename is literally "Black & White". Does anyone know what to do about the ampersand in Terminal? Or is there another way to start installed programs in Wine that I'm missing other than through Terminal? Thanks!

Backstory: I''m trying to use DRb for some in-house utility code. DRb itself seems to work fine, but I found that when I misspelled a method name, instead of reporting back a NoMethodError, the IronRuby process crashed immediately to the console. This is using a relatively recent build of IronRuby from Github Steps to repro: e = RuntimeError.new ''xyz'' dumped =

In Rails 2, if I used an url in a plain text message it was sent as is, but it seems to be changed in Rails 3. The url http://ab.cd/ef?g=1&h=2 seems to be now translated to http://ab.cd/ef?g=1&amp;h=2 even if the message is plain text. Is it correct? I''ve written my tests previously considering it should not be encoded in plain text messages and these tests are failing when

On Jul 10, 2007, at 15:39, Chris Lattner wrote: > On Tue, 10 Jul 2007, Sandro Magi wrote: > >>> used. Your choices are to either override malloc/free for both >>> the JIT and the program or for neither of them. >> >> I want to 'intercept' ALL allocations actually, including the >> stack if possible, so the above suits me just fine. > >