similar to: detecting the source of memory consumption (example provided)

Hi A quick question. Standard errors reported by gee/yags differs from the ones in geeglm (geepack). require(gee) require(geepack) require(yags) mm <- gee(breaks ~ tension, id=wool, data=warpbreaks, corstr="exchangeable") mm2 <- geeglm(breaks ~ tension, id=wool, data=warpbreaks, corstr="exchangeable", std.err = "san.se") mm3 <- yags(breaks ~

Hi All, I had posted a question on a similar topic, but I think it was not focused. I am posting a modification that I think better accomplishes this. I hope this is ok, and I apologize if it is not. :) I am looping through variables and running several regressions. I have reason to believe that the data is being duplicated because I have been monitoring the memory use on unix. How can I avoid

Hello R-users: I am using "yags" for fitting GEE which is giving me the same result as "Proc GENMOD". Now I have couple of questions related to yags output. (By the way, someone told me to run the geeglm for the same analysis and I did run but did not get the same result as of genmod and don't know how to correct the geeglm codes so that all three will be same!)

Dear R-ers, I am just a simple 'end-user' of R and am trying to analyse data with a binary response variable (dead or alive) in relation to weight and sex (of young birds). As some of the birds have the same biological mother, I am using mixed models with the identity of the mother as a random factor. (please, Mick Crawley, when are you going to write a chapter on mixed models with binary

Dear R-ers, I am just a simple 'end-user' of R and am trying to analyse data with a binary response variable (dead or alive) in relation to weight and sex (of young birds). As some of the birds have the same biological mother, I am using mixed models with the identity of the mother as a random factor. (please, Mick Crawley, when are you going to write a chapter on mixed models with binary

I have included data at the bottom of this email. It can be read in by highlighting the data and then using this command: dat <- read.table("clipboard", header = TRUE,sep="\t") I can obtain solutions with both of these: library(gee) fit.gee<-gee(score ~ chem + time, id=id, family=gaussian,corstr="exchangeable",data=dat) and library(yags) fit.yags <-

i'm trying to learn R. i have no programing experience. i tried to add on a package and just picked "yags". i can't get it to work or get any help. --- > install.packages("yags") Warning in install.packages("yags") : argument 'lib' is missing: using 'C:\Documents and Settings\j\My Documents/R/win-library/2.6' trying URL

Here is an example given from ?yags library(methods) data(stackloss) Y1 <- yags(stack.loss~Air.Flow,id=1:21, data=stackloss) How can I access parts of the output. I tried: > str(Y1) Formal class 'yagsResult' [package "yags"] with 25 slots ..@ coefficients : num [1:2] -44.13 1.02 ..@ coefnames : chr(0) > Y1$coefnames Error in Y1$coefnames : $

Full_Name: Markus Jantti Version: 1.5.1 OS: GNU/Linux Unstable (Sid) Submission from: (NULL) (193.166.59.44) I was trying to get the package yags 3.20 by Vince Carey <stvjc@channing.harvard.edu> to run, but - after successfull installation -- loading the library failed with the message > library(yags) Error in stop(paste("Duplicated slot names: ", paste(slots[duplicated(slo

Hi I am using clang-6 to compile this C++ code and I see a strange temporary variable allocated at expression address 0x7ff1131536e8. If I change the ternary operator at line 483 to an if-else, the temporary is not allocated. Thanks Variables: ========= FFMPEGVideoCapture ffmpeg_video_capture_; cv::VideoCapture opencv_video_capture_; Function: ======== bool

markus.jantti@iki.fi wrote: > > Full_Name: Markus Jantti > Version: 1.5.1 > OS: GNU/Linux Unstable (Sid) > Submission from: (NULL) (193.166.59.44) > > I was trying to get the package yags 3.20 by Vince Carey > <stvjc@channing.harvard.edu> > to run, but - after successfull installation -- loading the library failed with > the > message > > >

Dear R users, I search the R archives and noted that the same problem has been posted but without solution. I know there IS instructions by the author of yags, but I just couldn't figured out. I know gee and geepack can also perform generalized estimating equation, but the reason why I need yags is I want to perform a Small Sample Adjustments by Michael P. Fay and Barry I. Graubard in

I am trying to locate instructions in an LLVM Pass by line and column number (reported by an third-party tool) to instrument them. To achieve this, I am compiling my source files with `clang -g -O0 -emit-llvm` and looking for the information in the metadata using this code: const DebugLoc &location = instruction->getDebugLoc(); // location.getLine() // location.getCol()

I need capabilities, for my data analysis, like the Pinheiro & Bates S-Plus/R package nlme() but with binomial family and logit link. I need multiple crossed, possibly interacting fixed effects (age cohort of twin when entered study, sex of twin, sampling method used to acquire twin pair, and twin zygosity), a couple of random effects other than the cluster variable, and the ability to

I just installed R 2.12.1, and when I went to run a few old programs with it, nothing worked. I got a ton of error messages saying such and such package was built before R 2.10.0 and needed to be reinstalled. These were not just warning messages, but error messages that prevent the programs from running when they were running just fine with R 2.10.1 For some of those packages, such as deSolve, I

Hello, Is it possible to derive Pan's QIC (2001 Biometrics 57:120) from either a fitted gee() object in the gee package or from a geese() fit in the geepack package? If so, would anyone be kind enough to provide me with code to do so? I realize that QIC is part of the output from yags() but I would like to use one of the other functions. Thanks. Richard

Hi , I use library(gee),library(geepack),library(yags) perform GEE data analysis , but all of them cannot do variable selection! Both step and stepAIC can do variable selection based on AIC criterion under linear regression and glm, but they cannot work when model is based on GEE. I want to ask whether any variable selection function or package under GEE model avaliable now? Thanks! Best,

Hi guys, I am trying to extract the class name of a parameter to a method call in objective-C. The code I am parsing is: - (void)testAddConcreteDataModel:(DFDemoDataModelOne*)helpmeh { [self.dataModels addObject:helpmeh]; } And the result I need is the type of class of helpmeh, which is "DFDemoDataModelOne". So far I have the following code, which outputs:

Any hints on how to do a significance test using gee? Is the "robust z" the thing to use? There is apparently another implementation of gee called yags (http://www.biostat.harvard.edu/~carey), but I can't figure out how to install it. I think it does significance tests. -- Jonathan Baron, Professor of Psychology, University of Pennsylvania Home page:

Dear R-help, I was recently wanting to use GEE with the negative binomial "family". It seems that this is lacking in the otherwise excellent implementations of the GEE methodology ( packages: gee, yags, geepack). I would have thought it a simple step to allow the creation of a family, i.e providing the link function (log mu) and the variance function (mu + mu^2/theta) , assuming theta