similar to: Error fitting ZIP with zeroinfl()

Displaying 20 results from an estimated 400 matches similar to: "Error fitting ZIP with zeroinfl()"

2015 Jun 01
3
[LLVMdev] PIC Micropchip Backend
I am interested in developing a backend for the PIC microcontrollers. Specifically, I plan to write for the 8-bit MCUs, but would hopefully also support the 16 and 32 bit models (eventually). It is my understanding that a backend for PIC16 was previously a part of the project but was dropped in version 2.9. Is there any development on this front currently? Is there any interest in developing this
2017 Apr 27
2
R installation problems on Linux Mint 18.1 via jessie-cran3
Okay folks, I give up and - frankly - I'm fed up! I thought I'd sorted all this last week, but clearly not. I've tried using mirrors from here in the UK, Ireland, France and the USA and whichever mirror I use, all I get is this: clive at climate ~ $ sudo apt-get update Hit:1 http://ubuntu.mirrors.uk2.net/ubuntu xenial InRelease Ign:2 http://dl.google.com/linux/chrome/deb stable
2009 Mar 01
2
Trusted Path Execution
I would like to know that there is or is not a way to prevent users from executing binaries that are not owned by root or that the user is in a particular group. Is this something I can achieve with TrustedBSD's MAC framework?
2009 Jan 22
1
help using zeroinfl()
Hi all, I have been trying to use zeroinfl() with the pscl package with R version 2.1.1. and with the newest versions of the contrib packages compatible with R 2.1.1. I have read the examples, the vignette and all the posts relating to zeroinfl() but I am still confused as to how to structure the model. Here is a small example; the error message is the same for big data sets
2008 Feb 18
1
fitted.values from zeroinfl (pscl package)
Hello all: I have a question regarding the fitted.values returned from the zeroinfl() function. The values seem to be nearly identical to those fitted.values returned by the ordinary glm(). Why is this, shouldn't they be more "zero-inflated"? I construct a zero-inflated series of counts, called Y, like so: b= as.vector(c(1.5, -2)) g= as.vector(c(-3, 1)) x <- runif(100) # x
2007 Jul 26
1
zeroinfl() or zicounts() error
I'm trying to fit a zero-inflated poisson model using zeroinfl() from the pscl library. It works fine for most models I try, but when I include either of 2 covariates, I get an error. When I include "PopulationDensity", I get this error: Error in solve.default (as.matrix(fit$hessian)) : system is computationally singular: reciprocal condition number = 1.91306e-34 When I
2006 Jul 20
0
Convergence warnings from zeroinfl (package pscl)
Dear R-Helpers, Can anyone please help me to interpret warning messages from zeroinfl (package pscl) while fitting a zero inflated negative binomial model? The console reports convergence and the parameters seam reasonable, but these <<Warning messages: 1: algorithm did not converge in: glm.fit(X, Y, family = poisson()) 2: fitted rates numerically 0 occurred in: glm.fit(X, Y, family =
2011 Jul 12
2
Deviance of zeroinfl/hurdle models
Dear list, I'm wondering if anyone can help me calculate the deviance of either a zeroinfl or hurdle model from package pscl? Even if someone could point me to the correct formula for calculating the deviance, I could do the rest on my own. I am trying to calculate a pseudo-R-squared measure based on the R^{2}_{DEV} of [1], so I need to be able to calculate the deviance of the full and null
2012 May 05
0
Getting predicted values from a zero-inflated negative binomial using zeroinfl()
Hi, I am a little confused at the output from predict() for a zeroinfl object. Here's my confusion: ## From zeroinfl package fm_zinb2 <- zeroinfl(art ~ . | ., data = bioChemists, dist = "negbin") ## The raw zero-inflated overdispersed data > table(bioChemists$art) 0 1 2 3 4 5 6 7 8 9 10 11 12 16 19 275 246 178 84 67 27 17 12 1 2 1 1
2009 Oct 30
0
NA values in Standard Error for zeroinfl()
I am fitting a model using zeroinfl() and it runs without errors, returning results that are generally consistent with my hypotheses. One of my variables is percent black (pblack). This variable was highly significant in some of the other count models I ran on the way to my current formulation. It is not significant in this model. As such I decided to try adding pblack^2 to the model to see
2012 Nov 09
1
predict.zeroinfl not found
Hi Just a quick problem that I hope is simple to resolve. I'm doing some work with zero inflated poisson models using the pscl package. I can build models using zeroinfl and get outputs fom them with no problem, but when I try to use the predict.zeroinfl function, I get Error: could not find function "predict.zeroinfl". I was using an older version of R, but still had the same
2012 Feb 03
0
zeroinfl package - Year effect and precision
Hello. I am using the zeroinfl package to fit a zero-inflated negative binomial. The explanatory variables are Year and Depth x STemp (interaction). I am in need of guidance for extracting the year effect and the associated precision. Thank you for your time. Cheers, Laura
2012 Aug 22
0
hat matrix for zeroinfl and hurdle objects
Hi, I am wondering if there is an easy way to access the hat matrix for zeroinfl and hurdle objects in the pscl library? Thanks, Chris [[alternative HTML version deleted]]
2012 Jul 25
3
zeroinfl problem: cannot get standard errors, hessian has NaN
Hi! I have three models. In the first model, everything is fine. However, in the second and third models, I have NA's for standard errors: The hessians also have NaN's (same for m2 and m3). What should I do about it? It there a way to obtain the hessian without transforming my variables? I will greatly appreciate your help! -- View this message in context:
2009 Oct 23
3
opposite estimates from zeroinfl() and hurdle()
Dear all, A question related to the following has been asked on R-help before, but I could not find any answer to it. Input will be much appreciated. I got an unexpected sign of the "slope" parameter associated with a covariate (diam) using zeroinfl(). It led me to compare the estimates given by zeroinfl() and hurdle(): The (significant) negative estimate here is surprising, given
2010 Feb 14
2
Estimated Standard Error for Theta in zeroinfl()
Dear R Users, When using zeroinfl() function to fit a Zero-Inflated Negative Binomial (ZINB) model to a dataset, the summary() gives an estimate of log(theta) and its standard error, z-value and Pr(>|z|) for the count component. Additionally, it also provided an estimate of Theta, which I believe is the exp(estimate of log(theta)). However, if I would like to have an standard error of Theta
2008 Sep 14
0
Question on glm.nb vs zeroinfl vs hurdle models
Good afternoon, I?m in need of an advice regarding a proper use of glm.nb, zeroinfl or hurdle with my dataframe. I can not provide a self-contained example, since I need an advice on this current dataset and its ?contradictory? results. So.... i have a dataset which contains 1309 cases and 11 variables, highly right-skewed and heavily zeroinflated (with over 1100 cases that have 0 value
2009 Nov 29
1
Convergence problem with zeroinfl() and hurdle() when interaction term added
Hello, I have a data frame with 1425 observations, 539 of which are zeros. I am trying to fit the following ZINB: f3<-formula(Nbr_Abs~ Zone * Year + Source) ZINB2<-zeroinfl(f3, dist="negbin", link= "logit", data=TheData, offset=log(trans.area), trace=TRUE) Zone is a factor with 4 levels, Year a factor with 27 levels, and Source a factor with 3 levels. Nbr_Abs is counts
2012 Mar 04
2
Can't find all levels of categorical predictors in output of zeroinfl()
Hello, I?m using zero-inflated Poisson regression via the zeroinfl() function to analyze data on seed-set of plants, but for some reason, I don?t seem to be getting the output for all three levels of my two categorical predictors. More about my data and model: My response variable is the number of viable seeds (AVInt), and my two categorical predictors are elevation (Elev) and Treatment
2010 Feb 14
6
Nginx Sock And Rails Envinroment Error
Hi There, Im running an amazon instance with nginx proxying to a unicorn sock. For some reason, even though i specify the production environment, when being visited by nginx, the site shows errors in development form. Interestingly, when running on a port rather than a sock, if i visit that port, the errors are rendered as normal with a 500 page, the same port, throught nginx, shows errors