similar to: How to update a column in a dataframe, more simply...

Dear R-Helpers, I want to compare the results of outputs from glmmPQL and lmer analyses. I could do this if I could extract the coefficients and standard errors from the summaries of the lmer models. This is easy to do for the glmmPQL summaries, using > glmm.fit <- try(glmmPQL(score ~ x*type, random = ~ 1 | subject, data = df, family = binomial), TRUE) > summary(glmmPQL.fit)$tTable

> > Hi all, > I have a vector xm say: xm = c(1,2,3,4,5,5,5,6,6) > > I want to return a vector with the corresponding probabilities based on the > amount of times the numbers occurred. For example, I should get the > following vector for xm: > prob.xm = c(1/9, 1/9, 1/9, 1/9, 3/9, 3/9, 3/9, 2/9, 2/9) > Using prop.table gives: Usage (with table) > prob.xm <-

Hi r-users,   I would like to extract the data that match.  Attached is my data: I'm interested in matchind the value in column 'intg' with value in column 'rand_no' > cbind(z=z,intg=dd,rand_no = rr)             z  intg rand_no    [1,]  0.00 0.000   0.001    [2,]  0.01 0.000   0.002    [3,]  0.02 0.000   0.002    [4,]  0.03 0.000   0.003    [5,]  0.04 0.000   0.003    [6,] 

Given the following dataframe: A=1:10 B=(a-5)^2 DATAFRAME=data.frame(A,B) How can I sort DATAFRAME increasing (or decreasing, for that matter) by B without making reference to A, or any other column? I've read ?order and ?sort but cannot seem to figure this out. Thank you. Mark

Hi all, I have a vector xm say: xm = c(1,2,3,4,5,5,5,6,6) I want to return a vector with the corresponding probabilities based on the amount of times the numbers occurred. For example, I should get the following vector for xm: prob.xm = c(1/9, 1/9, 1/9, 1/9, 3/9, 3/9, 3/9, 2/9, 2/9) Any help greatly appreciated. -- Thanks, Jim. [[alternative HTML version deleted]]

Hi All, New to R, but committed. I looked in a number of places but can't figure out my current problem. I have date of the type: Time Type1 Type2 Type3 1 .50 .25 .25 4 .55 .25 .20 5 .65 .20 .15 etc which describe the frequency of types 1, 2 and 3 (adding up to 100%) over time. I would like to create a stacked bar chart showing these

Hello I have a longitudinal dataframe organized in the long format and would like to make comparison between successive rows if certain conditions apply. Specifically, I have four variables of interest: grade, score, year, and schid, associated with each school with 3 measurements per school per grade, therefore the rows are temporally ordered and each school occupies multiple rows. For example,

Hi R-helpers, I have a dataframe (called data) with 100 columns, the columns of which are named with integers ranging from 1900 to 1999. I wish to extract those columns which names are >=1950 and <=1970. I tried: data2<-subset(data,select=(names(data)>=1950 & names(data)<=1970)) but that doesn't work. Any ideas? Thanks! Mark [[alternative HTML version deleted]]

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I tried to compare if cch() and coxph() can generate same result for same case cohort data Use the standard data in cch(): nwtco Since in cch contains the cohort size=4028, while ccoh.data size =1154 after selection, but coxph does not contain info of cohort size=4028. The rough estimate between coxph() and cch() is same, but the lower and upper CI and P-value are a little different. Can we

Dear R-users, I have output files having a variable number of tables in the following format: ------------- 1 Pietje I1 I2 Value 1 1 0.11 1 2 0.12 2 1 0.21 2 Jantje I1 I2 I3 Value 1 1 1 0.111 3 3 3 0.333 ... ------------- Would there be an easy way of turning this into (a list of) data.frames with names Pietje, Jantje and variables I1,I2,...Value? (I1,I2 are string or categorical,

dear R-team I need to find the min, max values for each patient from dataset and keep the output of it as a dataframe with the following columns - Patient nr - Region (remains same per patient) - Min score - Max score Patient Region Score Time 1 1 X 19 28 2 1 X 20 126 3 1 X 22 100 4 1 X 25 191 5 2 Y 12 1

Hello, I was wondering if there was a method in Rails that returns the sum of a column. For example, I have a column called ''score'' and writing a SQL statement such a ''select sum(score) from table_name'' does return the sum of the values in the column. In the past (not too long ago being a newbie), I defined all sorts of methods only to discover that Rails

Dear all, Lets say I have the following data frame: > set.seed(1) > col1 <- c(rep('happy',9), rep('sad', 9)) > col2 <- rep(c(rep('alpha', 3), rep('beta', 3), rep('gamma', 3)),2) > dates <- as.Date(rep(c('2009-10-13', '2009-10-14', '2009-10-15'),6)) > score=rnorm(18, 10, 3) > df1<-data.frame(col1=col1,

Hello, I have a ggplot that has the looks of the plot that I want, but it doesn't have the right layout. The data is an ordered melted dataframe: - ID - type (to use for a faced grid) - time - type - time - value (POSIXct) - pos (to use for a faced grid, this is an index to split the plot) The goal of the plot is to create a time line for each ID (different points of time). The ID's

Dear useRs, I reran an analysis with bam (mgcv, version 1.7-17) originally conducted using an older version of bam (mgcv, version 1.7-11) and this resulted in the same estimates, but much lower standard errors (in some cases 20 times as low) and lower p-values. This obviously results in a larger set of significant predictors. Is this result expected given the improvements in the new version? Or

Hello R users, I'd like to ask a question about how to add a new column. So, below is my situation. In order to perform the repeated ANOVA, I first imported the following table. score=read.csv("patients_tests.csv"); subject test1 test2 test3 test4 test5 test6 test7 1 ab 0.17687 0.16715 0.17009 0.16480 0.16116 0.24502 0.17975 2 cl

Hi, I am helping another R user (off list) and I would like to email her an R script containing the data she needs and the code to solve her problem. I have made a small dummy dataset, but instead of sending her a CSV I would prefer to send the data embedded in the script, so there would be a like in the script like: my.df<-c( etc, etc, etc I have made the dataframe (in a spreadsheet) and

I am looking for the following simple question. I have a data frame with names and numbers, divided in categories. I would like to produce a text file with page breaks, listing the names and numbers by category, and totalling the numbers. Example: Name<-LETTERS[1:6] Score<-rep(5:8,length.out=6) Form<-rep(1:2,each=3) x<-data.frame(Name,Score,Form) This gives approximately

Hello, I have to run a general linear mixed model which looks at 2 dependent variables at the same time (var1 divided by var2). I have tryed to search for such a kind of model structure but since I just started using R my search was not successful. Especielly since I only have an old SAS GENMOD code structure from my project supervisor as an indication. My question is no, does there exist a code