similar to: Package implementing unconditional tests for comparing two binomials

Dear list, does anyone know of a R-package that has implemented the increasingly popular inclusion of the number of patients at risk below Kaplan-Meier curves like in http://bloodjournal.hematologylibrary.org/content/vol116/issue19/images/large/zh89991058760001.jpeg any hint (or negative answer) is much appreciated. Thanks Thorsten -- Thorsten Raff 2nd Medical Department, University

Dear R-helpers I am wondering if there is an option to the survplot function in the design package that allows for drawing Kaplan-Meier plots starting from 0 instead of 1, similar like fun = 'event' in the standard plotting function used on a survfit object. I apologize in advance for having missed any obvious informational sources but I really didn't find anything in the

Dear R-helpers, this is just a notice to inform everyone that the current versions of XML and odfWeave don't seem to be playing nice with each other. Since it took me quite some time to figure that out, I thought that I let you know. In my case it helped to install an older version of XML but your mileage of course may vary. Best regards Thorsten -- Thorsten Raff 2nd Medical

Hello I have the problem that I want to transform a dataframe as generated by diagnosis <- rep(diagnosis[1:3], 3) marker <- gl(3,3) values <- rnorm(9) dataframe <- cbind(diagnosis, marker, values) dataframe <- dataframe[c(1:5, 7:9), ] into a matrix where levels(diagnosis) is indicating the rows of the matrix, levels(marker) the columns and values are the actual content of the

Dear R-helpers, I am trying to plot a Bland-Altman-Plot using the BA.plot function from the package MethComp. While there is a function to transform the values for analysis as shown in the snippet below, I would like to have logarithmic axes for display as well. The usual log = 'xy' does not work because of the properties of the y-asxis (positive and negative values). I am sure that

I''m going to cross-post this to the wxRuby ML because I know of at least one wxRuby expert who does not subscribe to ruby-talk. Curt Stephan Kämper [mailto:Stephan.Kaemper@Schleswig-Holstein.de] > > Hi all, > > having just started to work with wxRuby, I would like to > - display a Wx::Notebook > - with several widgets in each row > - where the text field in the row

Hi! As the subject line says, Macmillan dictionary gives me an error msg: Code: wine: Unhandled page fault on read access to 0x003ad6a1 at address 0x36a2e5 (thread 0009), starting debugger... Unhandled exception: page fault on read access to 0x003ad6a1 in 32-bit code (0x0036a2e5). Register dump: CS:0073 SS:007b DS:007b ES:007b FS:0033 GS:003b EIP:0036a2e5 ESP:0032feb4 EBP:0032febc

HI, You can do this in many ways: dat1<-read.table(text=" med1,med2,med3???? ?1,0,1?????? 0,1,1??? 2,0,0 ",sep=",",header=TRUE)?? #1st method library(reshape) dat2<-melt(dat1) dat3<-aggregate(dat2$value,by=list(dat2$variable),sum) ?colnames(dat3)<-c("name","sum(n11)") ?dat3 #? name sum(n11) #1 med1??????? 3 #2 med2??????? 1 #3 med3??????? 2

Hello I'm trying to get Macmillan Dictionary 2nd ed to work http://appdb.winehq.org/objectManager.php?sClass=version&iId=15607 Under self compiled Wine 1.3.10 on Debian Lenny (I do not know of (packaged wine) deb publicly available) It is told to be a Gold app so maybe it'll work somehow. Installs ok - I followed the instruction NOT to install QuickFind and - I Installed the

Hello R help members. I came across today with an article on Barnard's exact test (http://www.cytel.com/Papers/twobinomials.pdf), that is supposed to give a more powerful fisher.test - Because it doesn't assume that we know the row and column totals are in advance. Any pointers to such a function ? Thanks, Tal -- ---------------------------------------------- My contact information:

[my original message to s-news & r-help is attached ] No one possessed or knew of any S/R code for the sequential t-test. Also it doesn't appear in the SAS index. One or two suggested obtaining the S+ seqtrial software which may (or may not) cover this, but this seemed to be a bit of a "hammer to crack a nut". I have written a function based on the treatment in Wetheril

Hi all, I am just beginning to use R and encountered a problem in trying to draw a regression line using the command "abline(coef(var)" and similar ones but got the error "plot.new has not been called yet". Does anybody know how can I call plot.new? Is this an additional package to be found somewhere on the web? Is it a functionality that I just have to "activate"

Hi all, I am already using R under Window and would like now to try and install it under Unix; I read I need tcl/tk installed so I connected to http://www.scriptics.com downloaded the file and extracted them to a directory tcltk beside R. I configured (./configure) both packages (tcl and tk) and compiled (make) them but I am not sure about how to proceed now: should I launch the command make

Dear All, I know this may be a trivial question. In the past I have used glm to make logistic regressions on data. The output creates an object with the results of the logistic regression. This object can then be used to make predictions. Great. I have a different problem. I need to make predictions from a logistic regression taken from a paper. Thus I need to (by hand) enter the reported odds

Dear users, I can access an database oracle database using sql developer. This was done by importing an xml file that contains the login details - username, password and specifies that it uses the KERBEROS_AUTHENTICATION. I'm trying to connect R - so that it can access this database - do sql queries and convert the resulting tables into dataframes. I am a novice in SQL and database access

Dear R users, I?m trying to optimize simultaneously two binomials inequalities used to acceptance sampling, which are nonlinear solution, so there is no simple direct solution. Please, let me explain shortly the the problem and the question as following. The objective is to obtain the smallest value of 'n' (sample size) satisfying both inequalities: (1-alpha) <= pbinom(c, n, p1)

Dear R users, I?m trying to optimize simultaneously two binomials inequalities (used in acceptance sampling) which are nonlinear solution, so there is no simple direct solution. Please, let me explain shortly the the problem and the question as following. The objective is to obtain the smallest value of 'n' (sample size) satisfying both inequalities: (1-alpha) <= pbinom(c, n, p1)

Hello R-experts, I have a simple question: how do I aggregate data using the median function with na.rm = TRUE, i.e. aggregate(x, list(x$y, x$z), FUN = '????') I have tried 'median(x, na.rm = TRUE)' but that doesn't help. Any suggestions are very much appreciated, Thorsten

Dear R-Users, I am learning how to use the package VGAM to do multinomial regressions. I have worked through the example provided by UCLA stats group: http://www.ats.ucla.edu/stat/r/dae/mlogit.htm However - what I would like to learn is how to use the constraint option. So in the example given in the link i would like to introduce a constraint that does not allow individuals of age less than

Hi all, I would like to know which are the main differences between R under Windos and R under Linux/Unix and where I can find, if something exists, some materials and infos on line on this topic. Thank you very much, Filippo Biscarini *************************** Filippo Biscarini, Research and Development ANAFI (Italian Holstein Association) Via Bergamo, 292 26100, Cremona, Italy